Dipodomys merriami (Merriam's kangaroo rat): 138841763
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Entry
138841763 CDS
T11079
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138841763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138841763
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
138841763
SWR1 complex
138841763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
138841763
NCBI-ProteinID:
XP_069898737
LinkDB
All DBs
Position
Unknown
AA seq
3219 aa
AA seq
DB search
MQSSPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP
SGSSDGATVPLEGLSLPQAADLANKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLASSKAGSSPCLGSSSAASSPPPPASRLDDEDGDFQPQEEEEEDDE
ETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLEEPSSPSQTPSSHDSD
TRDGPEECAEEDPSQVVEVKPSPSVTQCNKQPWHPEEDDEEFTANEDEAEDEEDTIAAEE
QLEGEVDHAMELSELAREGELSMEELLQQYAGAYASDASAPGSGSSDEDEEDEDEEVDTN
SSDCEPEEATETEEAAQEDQEDSSSQSDSDEEQSEDEEDEHSEEEETSRSSESEESESDE
SEDAQSQSQVDEEEEEDDDFGVEYLLARDEEQSEADGGSGPPTPGPTTTLGPKKEITDIA
AAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLG
KTIQTISLLAHLAYEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLK
RQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQ
RRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKR
LHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFM
SVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLERIDMDRFDL
IGLEGRVSRYESDTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRT
VVVVNSPRTPLGPVPLRPPPVPELSTQNTPSLTPPVLPAPLMVSASPAASSLVPASRPPG
PVLLPPLQPNSGSLPQVLPSPLGVSSGTSQPPTPTLSLKPTPPAPVRLSPAPPPGSSSLL
KPLTVPPGYTFSPVAATTTSITTATTTTTAVPAPTPAPQRLILSPEMQARLPSGEVVSIG
QLASLAQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQH
HLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPSSMVNSTGV
VKIVVRQAPRDGLTPVPPLAPAPRPPGSGLPAMLTPRPTLSPGRLPTPTLGTARAPVPTP
TLVRPLLKLVHNPSPEITASAPGAAPMTISSSLHVPSSLPGPASSPIPMPNSSPLPSPVS
STVSVPVSSSLPIPVPTTLPAPTSVPLTIPISTSLPVSASGSALLTSATPALAPIVSAAS
GPPPLASAGPSPSMSALTLGLAAAPALSPPQTAGHPLLLAPTSSHVSGLNSPVAPACSPV
LVPASALASTFPSAPNPAPAPLLAPAPSASQTLANSMAPMMASQTAVLGPSPAPLTPLPV
LAPSPGSAPVLASPQTPLPVMAPSSVPGTPLASSSLVSAPTPVLAPASTQTMVPNPVPSP
LSSLASTQQTLALAPTLASTFSGSSPSQTHSLGTGNPQGPFPAQTLSLTPVSSLVPPAAQ
TLSLAPGAPLGPTQTLSLTPAPPLAPASPMGLAPAHTLTLAPASSSASLLAPASVQTLTL
SPTSVPVPTLGTAAAQTLALAPASQASSLVGAASLPVTMANRLPVAKDEPETLMFRSGPP
SPPSTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFRLSEAHGALAPIY
GTEVLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAAHQAVLFPQQRLDQLSEIIERFIF
VMPPVEAPPPSLHACHPPPWLAPRQAAFQEQLACELWPRARPLHRIVCNMRTQFPDLRLI
QYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQR
QALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT
RDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEESS
GSSVPSALEEEEETMASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFP
AGEGEEASRPGVEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQ
VEAARKDLDQAKEEVFRLPQEQEEGPGAGDEMSCGIGGGSHRRSKKVKAPERPGTRVSER
LRGARAENQGANHTPVTSTHHTRSTSTPSRCSPARERAPRPVPKSRPTPTLVPATIPAPV
PAPIPISAPNPVTVPIHSSPSSPPPPKIPPSCSSPACTPPPTCTPPPPHTPPPVQTSLLS
PSSLVQLDLPSLPDSPPVTNPPLSLRPEPELGTQALASVETLEMAGVTNSGSSPLTLVPP
KDLLPVAVEILPVSEKNLPVIPSAPSPTLEAGSIPNGQEQEVSDPAEGPILTVLPGREEL
PTSRSESNGLELPPSAASDEPLQEPLEPDRNLEELVEVRTLTSSPEKPQELVTAEVTAPS
TSSSVTSSPEDPSPARPPRRRTSADVEIRGQGTGQPGQPPGPKVLRKLPGRLVTVVEEKE
LVRRRRHRAAVSTLVPGVSETSTSPGSPSTRSMSGPESSPPAGGLCETAPTSSLPTPTQP
PFIARRRIELGVTGGGSPENGERALLTITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSS
SSTSKGKTNGADPGPGAETLIVAEPVLGPDPFHKPEPIILSPVEKRRRGRPPKARELPIP
GTISSPGDVNLESRTQPLPLPSSLPPLPPLLAYPTATVTNTVTTVTISTSPPKRKRGRPP
KNPSSPRPSQLPVLDRDSSSVLESCGLGRRQQPLGQGESEGSSSDEDGSRPLTRLARLRL
EAEGVRGRKSEGSMVVAVIQDDLDLADSGPGGLELAPPVVSLTPKLRSTRLRPGSLVPPL
ETEKVPRKRSGAPLGGSPGLTKRGRLQPPSPLGPEGSVEESEAEASGEEEDGDETSRRRP
GPRRLAGTTNQGDQRILRSNAPPHLSGPTISHRGRKAKT
NT seq
9660 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcccctgctcatcctcagctcccaattctacagacacagatggtg
tcggacggcatgacaggcagcaatcctgtgtcccctgcctcatctagttccccagcctct
agtggggcaggtggcatctccccccagcacatagctcaagattcttctttggatggacct
tcaggctcctcagatggtgccacagtgcccctggaagggctcagcttaccccaggctgct
gacttggctaataagggcccaaagtgggaaaagagccatgcagaaattgcagagcaagcc
aagcatgaagctgaaattgagactcggattgctgagcttcggaaggagggattctggtca
ctgaagaggctaccgaaggtgccagagcctccacggccaaaaggccactgggattatctg
tgtgaggagatgcagtggctctctgctgactttgctcaggagcgccgatggaaacggggt
gtggctcgtaaggtggtacgcatggtgatcaggcaccacgaggaacagcggcagaaagaa
gaacgggctcggagggaggagcaggccaagcttcgaagaattgcttccaccatggccaag
gatgtccggcagttctggagcaatgttgagaaggttgtgcaattcaagcagcagtcccgg
cttgaagaaaagcgcaaaaaagctttggacttgcacctagacttcattgtgggacaaact
gaaaagtactctgatctactgtctcagagcctcaaccagccactagcttccagcaaagct
ggttcctccccttgccttggttcttcctcagctgcctctagtcctccgccccctgcttcc
cggctggatgatgaagatggggacttccaaccccaagaggaggaggaagaggatgatgag
gagactattgaggttgaagaacagcaggaaggcaatgatgcagagacacagagacgtgag
attgagctgcttcgacgtgagggagaactgccattggaagagctgcttcgttccctccca
cctcagcttctggaagagccttccagtccctctcaaaccccctcatctcatgatagtgat
acccgagatggacctgaagaatgtgctgaagaggatccctctcaggtggtggaggtaaag
ccctcaccttcagtcacacagtgcaacaaacagccttggcatccagaggaagatgatgaa
gagtttactgccaatgaggatgaagcggaagatgaagaggataccatagcagctgaggag
cagttggaaggggaggtggatcatgccatggaactgagcgaattggctcgagaaggtgag
ctatctatggaagagctactacaacagtatgcaggagcctatgcctctgatgcctctgct
ccaggctctgggagtagcgatgaggatgaggaagatgaagatgaagaggttgacactaac
agttctgactgtgaaccagaggaggcgacagaaactgaagaggcagctcaagaggatcaa
gaggatagtagcagtcaatcagactctgatgaggagcagagtgaggatgaagaagatgag
cattcagaggaggaagaaacgagcagaagttccgaatcagaagaatctgagtctgatgag
tctgaagatgcacagtcacagagccaagtagatgaagaggaggaggaagatgatgatttt
ggggtggagtacttgcttgcccgggatgaagaacaaagtgaggcagatggaggtagtggg
cctcccactccagggcctaccactactctaggccctaagaaagaaattactgacatcgct
gcagcagctgaaagtctccagcccaagggttacaccttggccactacccaggtgaaaact
cccatccccctattactacggggccagctccgggaataccaacacattggactcgactgg
ctagttactatgtatgagaagaaactcaatggcattcttgctgatgagatggggctgggg
aagacaatccagaccatctccttgcttgcgcacttggcctatgagaaaggtaactggggt
ccccatttaataattgttcccaccagtgtgatgttgaactgggagatggagctgaaacgt
tggtgccccagctttaaaatcctcacttactatggagcccaaaaagagaggaagctcaag
cggcagggctggaccaagcccaatgccttccatgtgtgtattacatcttacaagctggtg
ctgcaggaccaccaggccttccgccgcaagaactggcgatatctcattctggatgaagct
cagaacataaagaacttcaagtcccagcgttggcagtctctgctcaacttcaacagccag
agacgtctacttctgacaggaactcccttgcagaatagcctcatggaactgtggtctttg
atgcactttttgatgccccatgtcttccagtctcatcgagagttcaaggaatggttctct
aaccctctaactggcatgattgaaggcagccaagagtataatgaaggtctagtcaaacgc
ttgcataaggttttgaggccttttttgctgcgccgcgttaaagtggacgttgagaaacag
atgcccaaaaagtatgaacatgttatccgctgccgactctccaagcgccaacgatgtctc
tatgatgacttcatggcacagaccacaactaaggagacactagccacaggccatttcatg
agcgttatcaacattttgatgcagctgcgaaaagtctgcaaccatccaaatctttttgat
cctcgacctgttacctctcccttcattaccccaggcatctgtttcagcaccgcctctttg
gtgctaagggccactgatgtccatccactcgagcggatagacatggaccggtttgacctt
attggcctggagggtcgtgtctcccggtatgagtctgatacgtttctgcctcggcaccgc
ctctcccgccgggtactgctagaggtagctactgctcctgaccccccacctcggcccaag
ccagtcaagatgaaagtcaacaggatgctacagccagtgcctaagcaagaaggtcgcaca
gtggtggtagtgaacagcccacggacgccccttggccctgtcccactccgacctcctcca
gtccctgagctctcaacccaaaatactcctagcctaacgcctccagtgttgccagcgcca
ttgatggtgtctgcctcacctgctgcatcctcacttgttcctgcatcccggccccctgga
cctgttcttttgcctcctctgcagcctaacagtggttctctcccccaggtgttgccatct
cccctgggggtttcgagtggcacttcacagcctcccacaccaaccctgtccctgaagcca
actccacctgccccagttcgtttgagtccagccccacccccaggctcctctagcctactg
aaacccctcacagtacctccaggctataccttctctcctgttgctgctactaccacctct
atcaccacagcgaccactaccaccacagcagtgccagctccaactcctgcaccacagcgt
ctcatcctgtctcctgaaatgcaggctcgcctgccatccggtgaagtggtcagcattggg
cagttggcctctttggcacaacgtccagtggctagtgccgggggaagcaaacctctcacc
ttccaaatccagggcaacaaactgactttgactggtgcccaggtgcgccagcttgctgtg
gggcagccccgcccgctgcaaaggaatgtggtgcacctggtgtcagcaggggggcagcac
cacctcatcagccagcctgcccatgtggccctcatccaggccgtcgccccgacccctggc
cccacccctgtctctgtgctgccttcttcgacccccagcaccacccctgcccctactggc
ctcagccttccgcttgctgctaaccaggtgccatcatccatggtgaatagtacaggcgtg
gtgaagattgtagtgagacaggcccctcgggatggactgactcctgttccaccgttggca
ccagcacctcgacctccgggttctgggcttccagctatgttgactccacgccccacatta
agccctggcaggttacccacacctactctgggtactgctcgggcccccgtacctacaccc
actctggtgaggccccttctcaagctggtccacaatccttcacctgaaatcactgcttca
gcacccggagctgctcccatgactatatcctcttctcttcatgtgccatcctcacttccc
gggccagcctcgtcaccaataccaatgcctaattcctctccccttcctagtcctgtgtcg
tctacagtgtcagtccccgtatcatcttcccttcccattcctgtccctaccacacttcct
gcccctacttctgttcccctgaccatccccatttcaacctccttgcctgtttcagcatca
ggctcagctctgttgaccagtgcaactccagcactggcacccattgtctcagcggcttct
gggccacctccattggcatcagctgggccttctccatcaatgtcagccttgactctaggt
ttggctgcagctccagccctgtccccaccacagacagctggtcatcctctcttgttggct
cccacttcttcacatgtttcagggttgaactcacctgtggccccagcatgctcacctgta
ctggtgccagcttctgctctagccagtactttcccatcagcgccaaatccagctccagct
ccccttctggctccggcaccttctgcatctcagactttagccaactctatggctcctatg
atggcttcacagacagcagtcctgggtccttctccagctcctctgactcctcttccagtc
ctggctccatcgccaggctctgctcctgtcctggcttcaccgcagactccacttccagtt
atggctccgtcatcagtgccaggaacccctttagcctcatcttcactggtgtcagctcca
actcctgtgttggctccagcatcaactcagactatggtaccaaatccagttccatcgcct
ctctcaagcctggcttctacgcagcagacactggccctagccccaaccttagcatccact
ttcagcggctcgtctccatctcagacacactctttggggacagggaaccctcagggcccc
tttccagctcagacattgtcattgactccagtttcatccctggtaccacctgcagcccag
acactgtctttggcaccaggagcaccactgggtccaacacagacactgtctctgactcca
gcacctcctctggctccagcttctcctatgggactggccccagctcacacactgactttg
gctccagcatcgtcatctgcttcactcctggccccagcttcagtgcaaacactgaccttg
agccccacctctgttcctgtgcccaccctgggaacagctgcagctcagaccctggcactg
gccccagcttcccaggcatcttcccttgtgggtgcagcttctttgcctgtcaccatggca
aaccggctgcctgttgccaaggatgagcctgagacactgatgtttcgctctggtcccccc
agccctccctccactgctacctcgttcagtggcccccggcctcgacggcagcccccacca
ccacctcgttcccctttctatctggattctctggaggaaaagcggaagcgacaacggtcc
gaacgcctggaacggattttccgacttagtgaggctcatggggccctggctcctatatat
gggactgaagtcctggatttttgtaccctgccccaacctgttgccagccccatcggccct
cgttctcctggccccagccaccccaccttttggacttatactgaggctgcccaccaggct
gttctgtttccccagcagcgactagaccagctatcagaaatcattgagaggttcatcttt
gtcatgcctcctgtggaggcacctcccccttccctgcatgcctgccacccacctccttgg
ctggccccccgccaggcagccttccaggagcaattggcctgtgagctttggccccgggct
cgtcctttgcaccgtattgtgtgtaacatgcgcacccagttccctgacttgagactcatc
cagtatgactgcggaaagttgcagacattggcagtgctgttgagacagctcaaggcagag
ggccaccgggtgctcatcttcacacagatgacccgaatgctggatgtattagagcagttt
ctcacttaccatggtcacctctacttacgtctggatgggtctactagggttgaacagaga
caggccttgatggaacggttcaatgcagacaaacgaatattctgcttcatcctttcaact
cgaagtgggggtgtaggcgtgaacctgacaggagcagacactgttgttttttatgacagt
gactggaatcccacaatggatgctcaggcccaagatcgttgtcaccgaattggtcagact
agagatgtacacatctataggcttattagtgagcggacagtggaggagaacatcctaaaa
aaggcaaatcagaagagaatgttaggagacatggccattgagggaggcaacttcaccaca
gcctattttaaacagcagaccatccgagagctgtttgatatgcctctggaggaatcatcc
ggctcatctgtaccctcggcccttgaggaagaggaggagactatggctagcaaacagacc
catattctagagcaggccttgtgccgggcagaggatgaagaggatattcgtgcggctacc
caggccaaggctgaacaagtggctgaacttgcagaattcaatgagaatgatgggtttcct
gctggtgagggagaagaggccagtcgccctggagtggaggatgaggagatgtcccgtgct
gagcaggagattgctgcccttgtagaacagctgactcccattgagcgctatgccatgaaa
ttcctggaagcctcattggaggaagtgagccgagaggagctcaagcaagcggaagaacaa
gtggaagctgcccgcaaagaccttgatcaagccaaggaagaggtgttccgcctacctcaa
gaacaggaggaagggccaggggctggggatgagatgtcctgtgggattggtggaggcagc
caccggcgcagtaagaaagtcaaggctcctgagaggccggggactcgtgtcagtgagcgt
cttcgtggagcccgggctgagaatcaaggggcaaaccacactcctgtcacgtctacccat
catacccgtagtacctccacaccctctcgttgcagccctgccagggagcgagctcccagg
ccagtgcctaaatcacgacctactccaactttagttcctgctacaattcctgccccagtc
cctgccccaattcccatttcagccccaaatccagtcactgttcctatccatagctcacct
tcttccccacctcctccaaagattcctccctcttgttcttctcctgcctgtacccctcct
cctacctgtacccctccaccacctcataccccaccaccagtccaaacctctctcctaagt
ccttcctctcttgtccagctcgatttgccttctcttcctgactctcccccagtcacgaat
ccccctttgagcttgaggcctgagccagaactgggtacacaagctttggcatctgtggag
accttggagatggctggtgtgaccaattctgggagttccccgcttactcttgtacccccg
aaggatctgctgccagttgctgttgagatcctacctgtgtcagagaagaaccttcctgtc
attccttctgcaccgagtccaaccctggaggctggcagcatccccaatggtcaagagcag
gaagtctcagatcctgctgagggacccatcctcacagtactgcctggcagggaggaattg
cccaccagtcggagtgagagcaatgggctggagctcccaccttcagcagcatctgatgag
ccacttcaggagccactggaacctgacaggaacttggaagagctggtagaagttcggacc
ctaacctccagcccagagaagccacaggaacttgttacagctgaagtcacagctccatcc
acctcttcttcagtcacctcctctcccgaggatccttcacctgcccggccccctcggcgt
cgcaccagtgctgatgtggaaattaggggtcaggggactggccagccagggcaacctcca
ggccccaaagtgcttcgcaagctgccaggacggcttgtaacagtagtagaggagaaagaa
cttgtgaggcgacggcgacaccgggcagctgtcagcactctagtacctggggtctctgag
acaagcaccagcccaggaagcccatcaacccgcagcatgtcagggccagaatcctcacct
cccgctggcgggctctgtgaaactgctcccacatcctcactgcccaccccaacccaacca
cccttcatagctcgtcgtcgaattgagctgggggtgactggtgggggcagcccagagaat
ggagaaagggcactgctcaccatcactccccctgctgtgaaacgtcggagggggaggccc
ccaaagaagaacaggtcgccagcagatgctggcagaggggtggatgaggctccttcatct
tcatctacatcaaagggaaaaaccaacggggctgatccaggccctggagctgaaacgctc
attgtagccgagcctgtcctagggcccgatccctttcacaaaccagagcccatcattctg
tcacctgtggagaaaagaaggcgggggcgtccccctaaagcaagggaattgcccatccct
gggaccatttcctctccaggagatgtcaatttagagagccggacacagccactcccacta
ccatcatccctgccaccactcccaccactgctagcctatcccactgctactgtcaccaac
actgtcaccactgttaccatttcaacatccccacccaaacggaagcgaggccggcctcct
aagaatccatcatcacctcggcccagccagctccctgtcttggaccgtgacagctcttct
gtccttgagagttgtggattgggaaggcggcagcaacccctgggccagggagagagtgag
ggtagttcctctgatgaggatggaagccgtcccctcactcgcctggcccgcctgcggctt
gaagcagaaggggtgcgaggacgaaagagtgaagggtccatggtggtggctgtaattcag
gatgacctggatctagcagatagcgggccaggcgggttagaactggcacctcctgtggtc
tcattaacccccaaattgcgttcgacccggctgcgtccagggtctctagtccccccacta
gagactgaaaaggtgcctcgcaaacggtcaggagctccccttggtgggagtcctgggcta
acaaagcggggtcgtctgcagcccccaagtcccctggggcctgagggttcagtagaggag
tctgaggctgaagcctcaggtgaggaagaagacggggatgagacctcacgccgcaggccc
ggcccccgcaggcttgctgggaccaccaaccaaggggaccagcgcatcctacgcagcaat
gctcctccccacctgtctggccctaccattagtcacagaggccgaaaggccaagacgtga
DBGET
integrated database retrieval system
