Dipodomys merriami (Merriam's kangaroo rat): 138841932
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Entry
138841932 CDS
T11079
Symbol
Neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04350
TGF-beta signaling pathway
dmer04360
Axon guidance
dmer04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138841932 (Neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
138841932 (Neo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
138841932 (Neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dmer04515
]
138841932 (Neo1)
Cell adhesion molecules [BR:
dmer04515
]
Immunoglobulin superfamily
DCC/UNC5 family
138841932 (Neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
FN3_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
fn3_SORL1
Tissue_fac
Fn3_R-PTP-O
EphA2_TM
TMEM154
Herpes_UL74
TM_ErbB1
FAM176
Motif
Other DBs
NCBI-GeneID:
138841932
NCBI-ProteinID:
XP_069899024
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MAAERGARRPGGPSAGSWLCCVLWLLLGRAAAAARSGSPGPAAGASVRTFTPFYFLVEPV
DTLSVRGSSVILNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISNVVHSKHN
KPDEGYYQCVATVDSLGTIVSRTAKLIVAGLPRFISQPEPSSVYAGGSAILNCDVNADLV
PFVRWELNKQPLLLDDRVVKLPSGTLVISNVTEGDGGLYRCIVESGGPPKYSDEAELKVL
PDLEEMPNLVFLKQPSSLVRVLGQSAVLPCVASGLPIPAIRWMKNEEALDVESSERLALL
AGGSLEISDITEDDAGTYFCIADNGNETIDAQAELTVQAQPEFLKQPANIYAHESMDIIF
ECEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNTQ
AGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVSTRFIKLTWR
TPASDPHGDNLTYSVFYTKEGTARERVENTSRPGEMQVTVQNLMPATVYIFRVMAQNKHG
SGESSAPLRVETQPEVQLPGPAPNIRAYTTSPTSVTITWETPLSGNGEIQNYKLYYMEKG
TDKEQDVDVSTHSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAIRTLSDVPSAAPQNV
SLEVRNSKSIRIHWQPPSPATQNGQITGYKIRHRKASRKSDVTETLVPGTQLSQLIEGLD
RGTEYNFRVAALTVNGTGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTP
PENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLRAFNSVGEGVP
LYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQASILSHDTIRITWADNSLP
KHQKITDSRYYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSST
WSMTAHGTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNA
EIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKADSSDKM
PNDQASGSAGKGSRLPDLGSDYKPPMSGSNSPHGSPTSLDSNMLLVIIVSVGVITIVVVV
IIAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDP
NPIMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPF
DSQPPQPVISAHPIHSLDNPHHHFHSSSLASPARSHLYHPGSPWPVGTSLSLSDRANSTE
SVRNTPSTDTMPASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKS
FAVPAIPPPGPPTYDPALPSMPLLSQQALNHHIHSVKTASIGTLGRSRPPMPVVVPSAPE
VQETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcgcggcgcccggcgccccggcggcccctcggcggggtcctggctctgc
tgcgtgctgtggctgctgctcgggcgcgcggccgcggccgccaggagcggctccccgggg
ccggcggcaggagccagtgtccgaacattcactccgttttattttctggtggagccagtg
gacacactctcagttcgaggctcttctgttatattaaattgctcagcatattctgagcct
tcgccaaaaattgaatggaaaaaagatgggacttttttaaacttagtatcagatgatcga
cgccagctacttccggatggatctttgtttatcagcaatgtggtgcattccaaacacaat
aaacccgatgaaggttactatcagtgtgtagccactgttgatagtcttggaactattgtc
agcagaacggccaagctcatagtagcaggtcttccgagatttatcagccaaccagaacct
tcctcagtttatgctggaggcagtgccattctgaattgtgatgttaatgcagatttggtc
ccgtttgtgaggtgggaactgaacaagcagccccttcttctggatgacagagttgtcaag
cttccaagtggcacactggttatcagcaatgtgactgaaggagacgggggactctatcga
tgcatagttgaaagtggagggccaccgaagtacagtgatgaagctgaactgaaagttctt
ccagatctcgaggaaatgccaaacttggtatttttgaagcagccatcttccttagtcaga
gtgcttggtcagagtgcagtgttgccctgtgttgcttcaggacttcctattccagctatt
agatggatgaaaaatgaggaagcacttgatgtagaaagctctgaaagattggccttgctg
gcaggtggtagcctggaaatcagtgatatcactgaggatgatgcagggacgtatttctgc
atcgcagacaatggaaatgagacaattgatgcacaggcagagcttacagtgcaagcccaa
cctgaatttctaaaacaacctgctaatatatatgctcatgagtccatggatattatattt
gagtgtgaagtaactgggaagccaactccaactgtgaaatgggtcaagaatggggacatg
gtcatcccaagtgattacttcaaaattgtaaaggaacataatcttcaagttttgggtctg
gtgaaatcagacgaagggttttatcagtgcattgctgagaatgatgttggaaatacgcag
gctggagcccagctcataatccttgaacatgatgttgccatcccaacattacctcccact
tcactgaccagtgccactactgaccatctagcaccagccacaacgggaccactgccttca
gctcctcgggacgtcgtggcctccctggtctctacccgcttcatcaaattgacgtggcgg
acaccggcttcagatccccatggagacaacctcacctattcggtgttctacaccaaggaa
ggcactgctagggagcgtgttgagaataccagtcgcccaggagagatgcaggtaaccgtt
caaaacttaatgccagcgactgtatacatcttcagagttatggcccaaaataagcatggc
tcaggagagagttcggctccactacgagtagaaacacagcctgaagttcagctccctggc
ccagcccctaacatccgagcttacaccacgtcacctacttccgtaaccatcacgtgggag
acaccactgtcaggcaatggggaaattcagaactacaaattgtactacatggaaaaagga
actgataaagagcaggatgtggatgtttcaactcactcctacaccattaatgggctgaaa
aaatacacggagtatagtttccgggtagtggcctacaataaacatggtcctggagtctcc
acacaggatgttgccattcggaccctgtcagatgttcccagtgctgctcctcagaatgtg
tccttagaagtgagaaattccaagagtattaggattcactggcagccaccttctccagct
acacaaaacgggcagatcactggctacaagattcgccaccgaaaggcctcccgcaagagt
gatgtcactgaaaccttggttcctgggacccagctgtctcagctgattgaaggtctcgat
cgggggactgagtataattttcgagtggctgctctcacagtcaatggtacaggcccagca
actgactggctgtctgctgaaacttttgaaagtgacttagatgaaactcgggttcctgaa
gtgcctagctctcttcacgttcgcccacttgtcactagtattgtagtaagctggactcct
ccagagaatcagaacattgtggttcgaggctatgccattggttatggcattggcagccct
catgcccagaccatcaaagtggactataaacagcgctattacaccattgaaaatttggat
ccgagttctcattatgtgattaccctgagagcattcaacagcgtcggcgaaggcgtccca
ctgtacgagagcgcagtgaccaggcctcacacagacacttctgaagttgatttgtttgtt
attaatgctccatacactccagtgccagatcccactcccatgatgccacccgtgggagtt
caggcttccattctgagtcatgacaccataaggatcacgtgggcagacaactcactgccc
aaacaccagaagattacagactcccggtactacacagtccgatggaaaactaacatccca
gccaacaccaagtacaagactgcaaatgcaacaactttgagttatttggtgactggttta
aagccaaatacactctatgaattctctgtgatggtgaccaaaggtcgaagatcaagcacc
tggagtatgacagcccatgggaccacctttgaattagttcctacttctccacctaaggat
gtgactgttgtgagtaaagaggggaaacccagaaccataattgtgaactggcagcctccc
tctgaggccaatggcaaaatcacaggttacatcatctattacagtacagacgtgaatgca
gagatacatgactgggttattgagcctgttgtgggaaacagactgactcaccaaattcag
gagctaacccttgatacaccatactacttcaagatccaggcccgaaactcaaaaggcatg
gggcccatgtctgaagctgtccaattcagaacgccaaaagcggactcctctgataaaatg
cctaatgatcaagcctcagggtctgcaggaaaaggaagccggctgccagacctaggatcc
gactacaaacctcccatgagtggcagcaacagccctcacggaagccccacgtctctagac
agcaacatgctgctggtcatcatcgtctctgttggcgtcatcaccattgtggtggtggtg
atcatcgccgtcttttgtactcggcgcaccacctctcaccagaaaaagaaacgagctgcc
tgcaaatcagtgaacggctcccacaagtacaaaggtaactccaaggatgtgaaacctcca
gacctctggatccatcacgaaaggctggagctgaagcccattgataagtccccagaccca
aatcctatcatgacggatactccaattcctcgcaattctcaagatatcacaccggttgac
aattccatggacagcaatatccatcaaagacgaaattcatacagagggcatgagtcagag
gacagcatgtctacattggctggaaggcggggaatgagaccaaaaatgatgatgcctttt
gactctcagccaccccagcctgtgattagtgcccatcccatccattccctcgataaccct
caccatcatttccactccagcagcctcgcttctccagcccgcagtcatctctaccacccg
ggcagcccatggcccgttggcacatccttgtccctttcagacagggccaattccacagaa
tctgttcgaaacacccccagcactgataccatgccggcctcctcgtcccagacctgctgc
actgaccatcaggatcctgaaggtgctaccagctcctcttacttggccagctcccaagag
gaagattcaggccagagccttcccacagcccacgttcgcccctctcacccattgaagagc
ttcgcagtgccagcaatcccacccccaggacctcctacctatgatcctgcattgccaagc
atgccattactgtcccagcaagctctgaaccatcatattcactcagtgaagacagcttcc
attgggactttaggaaggagccggcctcctatgccagtggttgttcccagtgcccctgaa
gtacaggagaccacgaggatgctggaagactccgagagtagctacgaaccagatgagctg
accaaagagatggcccacctggaaggactgatgaaggacctaaatgccatcacgacagca
tga
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integrated database retrieval system
