Dipodomys merriami (Merriam's kangaroo rat): 138842049
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Entry
138842049 CDS
T11079
Symbol
Chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138842049 (Chd2)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138842049 (Chd2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
DUF3783
Motif
Other DBs
NCBI-GeneID:
138842049
NCBI-ProteinID:
XP_069899281
LinkDB
All DBs
Position
Unknown
AA seq
1832 aa
AA seq
DB search
MARQAGEEFVNLPRCLFTWCHSFLPGGRLSHSASEEASGSDSGSQSESEQGSDPGSGHGS
ESNSSSESSESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRR
SNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKREPSEDEQEQGASAESESE
QKRVKARRPVPRRTVPKPPVKKQTKTQRGKRKKQESSDDDDDDDEAPKRQTRRRAAKNVS
YKEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVFDSRQGKKGATGASTTVYAVEANGD
PSGDFDIEKDEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQW
LGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPTNEP
EYLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALK
KQPTYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQ
LYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA
LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN
SLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPA
KVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKAP
EENERENGQEVLQSLVRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKH
YPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP
QNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVL
ENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVST
SATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLP
RIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGF
TDTEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQ
LKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCR
VKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELNLTDKILPVETDKKPQGKQLQ
NRADYLLKLLRRGLEKKEAVTSGEEAKLKRKPRVKKENKAPRLKDEHGLEFSSPRHSDNP
SEEGEVKDDGLEKSPMKKKQKKKENKENKEKQLSSRKDKEKKKSKEKKEKPKGGDAKSSN
KSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKELDKPDKGLNVQ
EQLEHTRSCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDAQKLHKLYKMAH
KKRSQEEEEQKKKDDMIGGKKPFRPEASGSSRDSLLSQSHTSHGLHPQKPHIPGSHGPQM
HGHPRDNYSHPNKRHFSNADRGDWQRERKFSYGGGSSNPPWGGDRHHPYEQHWHKDHHYG
DRRHVDAHRSGSYRPNSLSRKRPYDQYSSDREHRGHRDYYDRHHHDSKRRRSDDFRPQNY
HQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKQGDYKQPLPPLSLAASDPRSPPSQKSP
HDSKSPLDHRSPLERSLEQKNNPDYNWNARKT
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccaggccggggaggagttcgtgaacctgccccggtgcctgttcacctggtgc
cactccttcctcccgggaggcagactcagtcactcagcctctgaggaagcttcgggttca
gactcgggcagccagtcggagagtgaacagggcagcgatcctggaagtggacatggcagc
gaatccaatagcagctcggagtcctcagagagccagtcagagtctgagagcgaatcagca
ggttctaagtcccagccagtccttccagaggccaaagagaagccagcatccaagaaggaa
cggatagctgatgtgaagaagatgtgggaagaatatcccgatgtgtatggggtcaggagg
tcaaatcgaagcagacaagagccctcacgatttaatatcaaagaagaggcaagtagcggg
tctgagagtgggagcccaaaaagaagaggccagaggcagctgaaaaaacaagaaaaatgg
aagcgggagccctcagaagatgaacaggagcaaggcgccagtgcagagagtgaatcagag
caaaaaagagtcaaggccagaagacctgtccccagaagaacagtacctaaacctcctgtt
aaaaagcaaacgaagactcagcgtggaaaaaggaaaaagcaagagtcttctgatgacgat
gatgatgatgatgaagctcccaagagacagactcgtcgaagagcagctaaaaacgttagc
tataaagaagatgatgactttgagactgattcagatgatctcattgagatgacgggagaa
ggagctgatgaacagcaagataacagtgaaactattgaaaaggtcttcgattcaagacag
gggaagaaaggagccactggagcttctactactgtgtatgctgttgaagctaatggagac
cctagtggtgactttgatattgagaaggatgaaggagaaatccagtatctcatcaaatgg
aagggttggtcttatattcatagcacctgggagagtgaagaatccttacaacaacagaaa
gtgaagggcctcaaaaagctagagaacttcaagaagaaagaggatgaaatcaagcaatgg
ttaggaaaagtgtctcctgaagatgtggaatatttcaattgccaacaagagctagcctca
gagttgaataaacagtatcagatagtagaaagagtaattgctgtgaagacaagtaaatct
acattgggccaaacagattttccagctcatagtcggaagccagcacctaccaatgaacct
gagtatctatgcaaatggatggggctgccttattcagagtgcagctgggaggatgaagcc
ctcattgggaagaagttccagagctgcatcgacagcttccacagtcggaacaactcaaaa
accatcccgaccagggagtgcaaggccctgaagcaaagaccacgatttgtagctttaaag
aaacagcccacatacttaggaggggaaaatctggagctccgagactatcagctagaaggc
ctcaactggctggcgcattcctggtgcaaaaataacagtgtaatccttgctgatgaaatg
ggcctagggaagaccatccagaccatatcattcctctcctacctgttccaccaacaccag
ctgtatggaccctttcttatagtcgtccctttatccaccctcacctcatggcagagggag
tttgaaatctgggcaccagagattaacgtagtggtttacataggtgacctgatgagcaga
aatacgatacgggaatatgaatggattcattcccaaaccaaaagattgaaattcaatgca
cttataacaacatatgagatcctcttaaaagataagactgtgctgggcagtattaactgg
gcctttctgggagtggatgaagcccatcggttgaagaatgatgactctttattatataaa
actctgattgatttcaagtccaaccataggctcctgattacgggcacccctcttcagaat
tccctcaaggagctctggtccttgctgcactttattatgccggagaagtttgagttctgg
gaagactttgaagaagaccatgggaaagggagggagaatggctaccagagtcttcataag
gtgctagagccgttccttctccggagagtcaagaaagatgtggagaaatctctgcctgcc
aaagtggaacagattctcagagtggagatgtctgctcttcagaagcagtattacaaatgg
attctaactaggaattacaaagctcttgccaaaggaactagaggcagcacctctggtttc
cttaacatcgtgatggaattgaaaaagtgctgcaaccactgctatctgattaaggcccca
gaagagaatgaaagggagaacgggcaggaagttcttcagtccctggtccggagcagcggg
aagctaattctgttagacaaactgctgacaagacttcgagaaagggggaaccgtgtcctt
attttctcccagatggtgaggatgctggacatcctggcagagtacctgactatcaagcat
taccctttccagcgtctggatggttctatcaagggagaaatccgaaagcaggcactggat
cacttcaatgcagatggatctgaggacttctgtttcctgctctccacaagggctggtggc
ctgggaatcaatttggcttctgcggacacagttgtcatctttgactccgattggaacccc
cagaacgacctgcaggcacaagcccgagcccatcgaattggccagaagaagcaggtaaat
atttatcgcttagttacaaaaggaactgtggaagaggagatcatagaacgggccaaaaag
aagatggttttggaccatttagtgattcaacgcatggataccactggccgtacagtcctg
gaaaacaattcaggaagatccaactcaaatccttttaataaagaagagctgacagctatt
ttgaaatttggagcagaggatctcttcaaagaacttgaaggggaggagtcagagcctcag
gagatggatatagatgaaattttacgcctagctgaaaccagggagaatgaagtgtccaca
agtgcgacagatgagcttctgtcacagtttaaggttgccaattttgcaacgatggaagat
gaggaggagctggaagagcgtcctcataaggactgggatgagatcattccagaagagcaa
aggaagaaagtagaggaggaggagagacagaaggagctggaagaaatttatatgctgcct
cggattcgtagttccaccaaaaaggctcagacgaatgatagtgattctgacactgagtct
aagaggcaggcccagaggtcctctgcctctgagagcgagacagatgactctgatgatgat
aagaagcccaagcgccgcgggcgtcctcggagcgtgaggaaagaccttgtggaggggttt
accgacaccgagatccgcaggtttatcaaagcttataagaagtttgggctccctctagaa
cggctagagtgcatagcacgtgatgctgagttggtggataagtctgtggcagacctgaag
cgcctgggtgagctgatccacaatagctgtgtatcagcaatgcaggagtacgaggaacag
ctgaaggagaatgccagtgaggggaaaggaccagggaaaaggagaggcccaaccatcaag
atatctggagttcaggttaatgtgaaatccattatccaacatgaagaagagtttgagatg
ctgcataaatctatccctgtggaccctgaagaaaaaaaaaagtactgcctaacctgccgg
gtcaaagctgcgcacttcgatgtggagtggggcgtggaggatgactcgcgcctgctgctg
ggaatttacgaacatggctatgggaactgggagttaattaagacggacccagagctgaat
ctgactgacaaaattctgccagtggagacagacaagaagcctcagggaaagcagttgcag
aaccgagccgactacctgctcaagctgctcaggaggggcctggagaagaaggaggcagtg
acgagcggagaggaggccaagttaaagcggaagcctcgagtaaagaaggaaaacaaagcg
cctaggctgaaagatgagcacggacttgaattttcatctcctcggcactcggataaccca
tcagaagagggagaggtaaaggatgatggcttagagaaaagtccaatgaaaaaaaaacag
aagaagaaagagaacaaggagaacaaggagaaacagctgagctcacggaaagacaaggaa
aagaagaagtcgaaagagaagaaagagaagcctaaaggtggtgatgccaaatcttcaaat
aaatcaaagcgatctcagggtcctgtccacatcacagcaggaagtgagcctgtccctatt
ggagaggatgaggatgatgacctggaccaggagacgttcagcatctgtaaggagagaatg
aggcccgtgaaaaaggccctgaaagagctggacaaaccggacaaggggctcaatgtgcag
gagcagctggagcacacccggagctgcctgctcaaaattggagatcggatagccgagtgc
cttaaagcttactcagaccaggagcacatcaaactgtggaggaggaacctatggattttt
gtttccaagtttacagaatttgatgctcaaaaactccataagttatataagatggctcat
aagaaaagatctcaagaagaggaggagcaaaagaagaaagatgacatgattggtgggaag
aaaccatttcgcccagaggcttcaggctcaagccgggattctctgctgtctcagtcccac
acctcgcatggccttcacccccagaagcctcatatacccggctctcatggcccacagatg
catggacacccaagagataactacagtcaccccaacaagaggcacttcagtaacgcagac
cgaggagactggcagagggaaaggaagtttagttacggtggtggcagcagcaaccctccg
tggggcggcgaccggcaccatccgtacgagcagcactggcacaaagaccaccattacggg
gaccggcggcacgtggacgcccaccgttccggaagctaccgccccaacagcctgtccaga
aagagaccgtatgaccagtacagcagcgaccgagaacaccggggccacagagattactac
gacaggcaccatcatgactctaagcggaggagatccgacgactttaggcctcagaactac
caccagcaggatttccggcgcatgtctgaccatcgaccccccatgggttaccacggccag
ggaccctcagaccactaccgctccttccacacagacaagcagggagattataaacagccg
ctgcccccgctgtccctggccgcctcggatccccgctcacccccttctcagaaatcccct
catgactccaagtcacccctggatcacaggtctcctctggagcggtccctagaacagaag
aacaacccggattacaactggaacgctcggaaaacataa
DBGET
integrated database retrieval system
