Dehalococcoides mccartyi GY50: GY50_0005
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Entry
GY50_0005 CDS
T02938
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dmg
Dehalococcoides mccartyi GY50
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmg03032
]
GY50_0005 (gyrB)
03400 DNA repair and recombination proteins [BR:
dmg03400
]
GY50_0005 (gyrB)
Enzymes [BR:
dmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GY50_0005 (gyrB)
DNA replication proteins [BR:
dmg03032
]
Prokaryotic type
DNA Topoisomerases
GY50_0005 (gyrB)
DNA repair and recombination proteins [BR:
dmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GY50_0005 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHB12792
LinkDB
All DBs
Position
complement(3882..5810)
Genome browser
AA seq
642 aa
AA seq
DB search
MLDVNKAKPGANSENYTASDIQVLEGLAAVRKRPGMYIGSTDQRGLHHLVYEIVYNSVDE
AMAGVCDRIKVIMFKDGSVSVEDNGRGIPVDIHPVTKISALETVMTVLHAGAKFGGKTYQ
VSGGLHGVGASVVNALAEWTTVKVRRNGKIYQQSYQRGKPSTPLEEIGVSDGSGTTTIFK
ADSQIFSTTEYDFEILTDRLREIAYLNKGLEVYIYDEQSDQERTYYFEGGITGFVRHLNR
NREVRHRQPIYITKKSDSTILEVAIQYNDGYSDSTLTFANCVNTIDGGTHLTGFRSALTR
AFNDYAHKSKFLKDTDPNLMGDDVREGIVAIVSVKLPEPQFEGQTKGKLGNIEIKSFVES
AVAEQLSLYLEEHPDDTKRILEKCITAAKAREAARKARDLIIRKSALDTGTLPGKLADCS
ERDASLCELFLVEGDSAGGSAKQGRNRRFQAILPLRGKILNVEKASPDKMLAHEEIRAII
TALAAGIDNDFDPAKLRYNRLVLMTDADVDGSHIRTLLLTFFFRHMPRLITESHLFIAQP
PLYKIKIGSTEHWVYNDAEKETLLSQTKSTKVDIQRYKGLGEMSAEQLWRTTMDPASRTL
LEVKVEDAAKADQIFNLLMGGEVAPRKAFIQSHSKTVKNLDI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgtaaataaagccaaaccgggtgcaaattcagaaaactataccgccagtgat
atccaggtacttgaaggtctggccgctgtccgcaaaagaccgggcatgtatatcggctct
actgaccagcgcggtttgcatcacctggtttatgaaattgtttataacagcgtagatgaa
gctatggccggggtatgcgaccggattaaggttatcatgtttaaagacggcagcgtcagc
gttgaagacaacggccgcggtatcccggtggacattcaccccgtaaccaagatttccgcc
ctggaaacggttatgaccgtactccacgccggtgccaaattcggcggcaagacctatcag
gtatccggcggtctgcacggggtaggtgcgtcagtagtaaacgctctggccgaatggact
acggtcaaggtcaggcgcaacggcaaaatctaccagcaaagctaccaacgcggcaagccc
agcaccccgctggaagaaataggtgtatcagacggttccggcaccaccactatatttaaa
gcggattcacagatattttccactacggaatatgactttgagatcctaaccgaccgcctg
cgggaaatagcctacctcaacaaagggcttgaagtatatatttatgacgaacaatctgac
caggagcgtacgtattattttgagggcggtatcaccggcttcgtccgtcacttaaaccgc
aaccgcgaagtgcgccaccgccagcccatttatataaccaaaaaatcagacagcaccatt
ctggaagtagccatccagtacaatgacggctactcggattctacccttacctttgccaac
tgtgtaaataccattgacggcggcactcatcttaccggtttccgttccgccctgacccga
gctttcaatgactacgcccacaagtcaaaattccttaaagacacagacccgaacctgatg
ggtgatgacgtgcgcgaaggcatagtagccattgtcagcgtcaaactgcccgaaccccag
tttgaaggacagaccaaaggcaaactgggcaatattgaaataaagagcttcgtggaaagc
gccgttgccgaacagctttccctttatctggaagaacaccctgatgataccaaacgcata
ttagaaaaatgtatcaccgccgccaaggcccgtgaagccgcccgcaaggcccgcgatctt
attatccgcaagagtgctctggatacaggcaccctgccgggcaagcttgcggattgttcg
gaacgggatgcttcactgtgtgaactctttctggtagaaggtgactcggccggtggttca
gccaaacagggccgtaaccgccgcttccaggctatactcccattacggggtaaaatttta
aacgtagaaaaggcctcaccggacaagatgctggcccacgaagaaatcagggctatcatt
accgctctggctgcaggcatagataatgattttgaccccgcaaaattgcgctacaaccgc
ctggtactcatgacagatgctgacgtggacggctcgcatatacgcacactccttttaacc
tttttcttccgccatatgccccgccttatcaccgaaagccatttgttcattgcccagccg
cctctttacaaaataaaaataggcagcaccgaacactgggtatacaatgatgccgaaaaa
gaaactttgctttcccaaaccaagagcaccaaagtagatatccagcggtataaaggtctg
ggtgaaatgagtgccgaacaactctggaggactaccatggatccagcaagccgcaccctg
cttgaagtaaaagtggaagatgccgccaaggctgaccagatttttaacctgctgatgggc
ggtgaagtggctccccgcaaggcctttatccagtcccattccaaaacagttaagaatctg
gatatctaa
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