Dehalococcoides mccartyi GY50: GY50_0058
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Entry
GY50_0058 CDS
T02938
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
dmg
Dehalococcoides mccartyi GY50
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmg03400
]
GY50_0058 (radA)
DNA repair and recombination proteins [BR:
dmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GY50_0058 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
AAA
AAA_22
ABC_tran
NTPase_1
AAA_30
RecA
nSTAND3
NACHT
DAP3
Rad51
Isochorismatase
KdpD
AAA_5
AAA_14
NPHP3_N
SLFN-g3_helicase
TackOD1
zf-RING_10
AAA_19
DUF815
ATPase_2
GvpD_P-loop
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AHB12844
LinkDB
All DBs
Position
53416..54804
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AA seq
462 aa
AA seq
DB search
MEKSRRVYVCSNCGRESLKWLGRCPGCQEWNTLEETMVVSPVGRKNEFARVISPAAELSS
LQAAETTRRSLSISEFNRVLGGGIVPGSLMLLGGEPGIGKSTLLLQVAASVAQSGGKVVY
VSGEENPAQIKMRAQRLGISGEGLFLMAETDLNAILAQLSVLSPSLVVIDSIQTVFLPEL
EAAPGAINQVRESALRLMQWAKSSGASVFITAHVTKEGNIAGPRILEHIVDVVMYFEGES
QSAYRLVRSVKNRFGSTNEVGIFEMKSEGLVEVANPSQIFLSNRQTNTVGSAVTAVLEGS
RPLLVEVQALTNTTSFGQPRRTANGVDFNRTLMIAAVLSKRLSMRLGTQDIIVNATGGIR
LDEPAADLAIALAIASSYRDIGVCPETIALGEIGLSGEMRTISHLERRLSEASRLGFKRA
LVPAGANCHNVHNIQIIPVSTVKEAVRLALTGVKTETEDVFE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagccgtagagtttatgtttgttccaactgcgggcgtgagagcctgaagtgg
ctggggcgctgtcccggctgtcaggaatggaatacccttgaagaaacaatggttgtttca
cctgtagggcgtaaaaatgaatttgcccgtgttatcagcccggcggctgagctttccagt
ctgcaggcagccgaaaccacccggcggagtttatctatttcggagttcaaccgggtatta
ggcggcggcatagtgccgggttcgcttatgcttttgggtggtgagccgggaatcggcaaa
tccactcttcttcttcaggtggcggcttcggtagcacaaagcggcggtaaggtagtatat
gtttcaggggaagaaaaccccgctcagataaaaatgcgcgcccaacgtcttggtatcagc
ggcgaagggcttttccttatggctgagaccgaccttaatgccattctggctcagctttca
gtcctcagcccgtcattggtcgttattgactctatccaaactgtattcctgccggagctt
gaggccgcacccggtgctataaatcaggtgcgtgaatcagccctccgccttatgcagtgg
gctaaaagcagcggtgccagtgtatttataacagcccatgttactaaagaaggcaatata
gccgggccgcgcatattggaacacatagtagatgtagtcatgtactttgagggagagtcc
cagagtgcttaccgtttagtgcgttctgtcaaaaaccgcttcggttccactaacgaagtg
ggtatatttgaaatgaaaagtgaaggtctggtagaagtagctaacccttcccagatattt
ttatcaaatcgccagacaaacacggtaggctcggctgtaaccgctgtactggagggcagc
cgtcctttgctggttgaggtgcaggcacttaccaataccaccagtttcggccagccgcgc
cgcactgccaacggggtggattttaaccgcacccttatgatagctgcggtcctctccaaa
cgcctgtccatgcgtttaggtacgcaggacattattgtaaacgccaccggcggtatccgt
ttggatgagccggctgcagatttggctattgcactggctattgcttccagttaccgggat
atcggcgtatgccccgaaactatcgctctgggagagattggtctttctggggaaatgcgg
actatttcccatctggaaaggcgtctttccgaggccagccgtttgggttttaaaagggct
ttggtaccggccggtgctaactgccacaatgtacataatatccagataattccggtttca
actgtcaaagaggcagtgaggctggcacttaccggggtgaaaacggagacggaagatgtt
tttgaatga
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