Dehalococcoides mccartyi GY50: GY50_0460
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Entry
GY50_0460 CDS
T02938
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dmg
Dehalococcoides mccartyi GY50
Pathway
dmg00300
Lysine biosynthesis
dmg00470
D-Amino acid metabolism
dmg01100
Metabolic pathways
dmg01110
Biosynthesis of secondary metabolites
dmg01120
Microbial metabolism in diverse environments
dmg01230
Biosynthesis of amino acids
Module
dmg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GY50_0460 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GY50_0460 (lysA)
Enzymes [BR:
dmg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GY50_0460 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Integrase_Zn
Motif
Other DBs
NCBI-ProteinID:
AHB13243
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Position
413077..414381
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AA seq
434 aa
AA seq
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MEPRIQVFPKNAEVKNNRLVIGGADVTGLCAKHGTPLYIFDESTIRQNCRDFKREFSRRY
ADSSVSYASKAFLHPALLKILAEEGMSLDVVSGGELSIANNAGFPMDMVYFHGNNKSAEE
LRLALRLHVGRIVVDSFDEIKLLSKLADESGHIPDILLRLTPGVDAHTHHHITTGKLDSK
FGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLDFAAQVQERYGF
DIEELDIGGGYGVQYEVDKPAPAVSVYAEAIGAKIVAKCHSLKLAPPSLNIEPGRAIIAQ
AGVALYTVGVIKDIPGIRLYASVDGGMGDNIRPALYEAKYEAVVANNVQSAEKQKVTIAG
KFCESGDILITDIELPVLKTGDILAVPCCGAYCLPMSSNYNGYQRPAVVMLKNGEDRLIR
RRETVEDLSHLDSV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaagaatacaagtattccccaaaaacgctgaagtaaaaaataaccgcctggtt
attggcggagcggatgttaccgggctttgtgccaagcatggcacgccgctttatatcttt
gacgagtctaccatccgccagaattgccgagatttcaagcgggaattttcacgccgctat
gctgacagttctgtcagttacgcttcgaaagcctttttacatccggctttattgaaaata
ttggccgaagaaggtatgagtctggatgtggtttcaggcggagagctttccatagccaat
aatgccggttttcctatggatatggtttatttccatggaaataacaaatctgccgaggaa
cttcggctggcactccggctgcatgtagggcggattgtagtagatagttttgatgaaatc
aaattgctttcaaaattggcggatgaaagcgggcacataccggatatactcctcaggctt
acccccggagttgatgcccacactcaccaccatattactaccggcaagctggattcgaag
tttggttttcctctgttccaggcagctgaagcggtaggtctggctatggctcaggccagc
ttaaatctggtagggtttcatttccatatcggttcccagatatttgaaactcagcccttc
cttgatgccatagatttggtattggattttgccgctcaggttcaggaacgttatggcttt
gacatagaagaactggatatcggcggcggctatggtgttcagtacgaagtagacaagcct
gcacctgcggtatcggtttatgcagaggctatcggtgctaagattgtagctaaatgtcat
agtttgaaactggcccctccaagcctgaatattgaaccgggacgggctatcatcgctcag
gcaggggttgcattgtatacggtaggggttatcaaagatatccccggcattcgtctgtat
gcctcggtggacgggggcatgggggataatatccgcccggctttgtatgaggcaaagtac
gaagctgtggtggcaaacaatgtacaatctgctgaaaagcaaaaggtaactatagccggc
aagttttgcgaatccggtgatatacttataaccgatattgagctgcctgtcctcaagaca
ggtgatatactggcagtgccctgctgcggggcttactgtttgcctatgtccagcaattac
aacggctatcagcgcccggcggtagtaatgctgaaaaatggtgaagaccgcctgatacgg
cggcgtgaaactgtggaagaccttagccatctggattcggtctaa
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