Dehalococcoides mccartyi GY50: GY50_0466
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Entry
GY50_0466 CDS
T02938
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
dmg
Dehalococcoides mccartyi GY50
Pathway
dmg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GY50_0466 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmg03032
]
GY50_0466 (dnaB)
Enzymes [BR:
dmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GY50_0466 (dnaB)
DNA replication proteins [BR:
dmg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GY50_0466 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
nSTAND3
divDNAB
AAA
TIP49
RuvB_N
AAA_22
AAA_16
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AHB13249
LinkDB
All DBs
Position
complement(418884..420260)
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AA seq
458 aa
AA seq
DB search
MLDAKLPPYDVDAEESVSGSLLIDGQAIFDIIPILKPQDFFTEPNRLIFEACMSLYGRSE
AINQVTVAQELERLGKLERCGGSAYLSHVVTVVPTSLDIEHYARIVYRLSVMRQLIDAGQ
KISELGFKADPDVSDSLGKAEDLLFRLRHERSSLGFTHIKNILDKYFEPVPVPGSEGYQA
IPHVLTGLTGMDTFLGGLQRSDLIIMAGRPSMGKTSLALNIARNAAVEQRACTAIFSLEM
SRESLVQRLLSNEAAVNSRSIRLNESNPEEERKIMDAIGVLSEAPIFIDDSPQIRVAEIR
SKALRLRYEQNIDLIIVDYLQLIQGEGNTKENRVQEISYISRSLKGIARELNVPVIAISQ
LSRAPEFRSSHQPQLSDLRESGSIEQDADIVVFIYRDEFYYKEEEWANLHPDQEYPREIA
DIIIAKHRNGPIGTVKCRFRHDLTRFENLGSSTEPSFL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgatgccaagctgcccccttatgatgtggatgccgaggaatcggtaagcggctct
ctgctgatagacgggcaggctatttttgatattatacctatcctgaagccgcaggacttc
ttcaccgaacccaaccgccttatctttgaagcctgcatgtccctttacgggcggagtgaa
gccatcaatcaggttaccgtagcccaggaactggaacggctgggcaagctggaaagatgc
ggcgggtcagcttacctgagccatgtggttacggtagtccctacctcactggatattgaa
cactatgcccgcatagtttaccgcctttcggttatgcggcagcttattgatgcggggcaa
aaaataagcgaactgggtttcaaggctgaccctgacgtttcggattcactcggcaaagcc
gaagacctgctattccgccttcgccatgaacgctccagtctgggctttacccatattaaa
aatattctggataagtattttgaacctgtacccgtacccggcagcgagggctatcaggca
ataccccatgtacttaccgggctgaccggcatggatactttcttaggcgggctgcagcgt
tcagaccttattattatggcgggacgcccctctatgggaaaaacctcgctggctctgaat
attgcccggaatgcggctgtagaacaaagggcttgcacagccatattcagcctggaaatg
tcccgcgaatctctggtgcagcgtttgctttccaacgaagccgcggtaaattcacgttcc
atccgcctgaatgaaagcaaccctgaagaagaacgtaaaataatggatgccatcggcgta
ctttccgaagcgcccatttttatagatgactcaccccagataagggtagccgaaatacgg
agcaaagccctgcggctgcgctacgaacaaaatatagaccttattattgtggattacctt
cagcttattcagggtgaaggtaacaccaaagaaaaccgggtacaggaaataagctatatc
tcacgttcactgaaaggtattgcccgcgaactgaatgtgccggttatagccatttcccag
ctttcccgtgccccggaattccgctcgtcccatcaaccacagctttcagatttgcgtgaa
tcaggctctattgaacaggacgcggatatagtggttttcatataccgagacgagttttat
tacaaggaagaggaatgggctaacctccacccggaccaggaatacccgcgcgaaattgcg
gatattatcatagctaaacaccgtaacggtcctatcggtactgtaaagtgccgcttccgc
catgacctgacccgctttgaaaatctggggtcaagcacggagcccagcttcttatga
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