Dehalococcoides mccartyi GY50: GY50_0472
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Entry
GY50_0472 CDS
T02938
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
dmg
Dehalococcoides mccartyi GY50
Pathway
dmg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GY50_0472 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmg03400
]
GY50_0472 (uvrA)
DNA repair and recombination proteins [BR:
dmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GY50_0472 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GY50_0472 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_25
AAA_29
nSTAND1
RsgA_GTPase
AAA_33
AAA_23
DnaJ_CXXCXGXG
NACHT
AAA_21
Viral_helicase1
YhfH
Motif
Other DBs
NCBI-ProteinID:
AHB13255
LinkDB
All DBs
Position
425053..427893
Genome browser
AA seq
946 aa
AA seq
DB search
MAQEYIKIKGAREHNLKNIDVQIPRDKLVVVTGLSGSGKSSLAFDTVYAEGQRRYMESLS
SYARQFLGRMEKPDVDHIEGLSPAIAIDQKGVSHNPRSTVGTVTEIYDYLRLLFARTGHP
HCPECGKEISAQSVEQITDAVQTLAEGTKILILGPLVRGRKGEYVQMFKDLRKSGYARVR
VDGQIRDLSEEIELDKNKKHDIEAVVDRLVVGQAGGQGRIADSVETALKLGGGLVIISVV
DGQDMLFSEKFSCADCGVSLGEIEPRTFSFNTPHGACPTCMGLGAKMELDPDLIIPDKSL
SLADGAISPYQTQNWYFGQVEDLARRAGFSVNKPVSTFTPAQMQVLLYGEGGEIHKYRNR
YGRVREYTSGFEGIIPRLDRLYRDSESQGVRESIEKYMLASPCQACGGKRLRKEALSVKI
GELNIADVAAMSVDEQFKWANELAGKNTIFNKREQLIAAQILKEIRSRLGFLNNVGLEYL
TVDRIAGTLSGGEAQRIRLASQIGSGLMGVLYVCDEPTIGLHPADDTRLVETLQKLRDLG
NTILVVEHDESVMRAADYIIDMGPGAGEHGGRVVATGNITEIMQNPASLTGQYLSGVKVI
PVPEKRRDGNGQEIVVLGARQNNLKNIDVHIPLGKLVCVSGVSGSGKSTLVTDILFKHLA
QVFYGAKDRAGGADAITGTEHIDKIIEINQSPIGRTPRSNPATYTGAFTHIRELFASVPE
AKVKGYGPGRFSFNIKGGRCETCGGEGYIQIEMQFLPDVTVPCEVCHGARYNREVLEIKF
KDKTIADVLDMTVDRALEFFENFPKISSKLQTLQDVGLGYIRIGQPAPTLSGGEAQRIKL
ATELSKRATGRTLYILDEPTTGLSFEDVAALLRVLQRLVDSGNTVVVIEHQLDVIKNADW
IIDLGPGAGVKGGQIVAEGIPEEIALNKASVTGKYLRRVLPKIKPA
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggaatatataaagataaaaggtgcccgcgaacacaacctcaaaaatatagat
gttcagattccccgtgacaagctggtggttgtgaccgggctttcggggtcaggtaagagt
tcactggcttttgataccgtttatgccgaaggtcagcgccgttatatggagtctctttca
tcatacgcccgccagtttctgggcaggatggaaaaaccggatgtagaccatatagagggg
ctttcaccggctatcgccattgaccagaagggtgtcagccacaacccccgttccaccgtg
ggtacggtaactgaaatatatgattatctgcgtttgctgtttgcccgcaccggtcaccct
cactgccctgagtgcggcaaggagatttccgcccagagtgtagagcagataacagatgct
gttcaaacacttgcggagggtacaaaaatacttattctggggccgctggtgcggggacgc
aagggcgagtatgtccagatgtttaaagacctgcgtaagtcaggttacgccagagtgagg
gtagacgggcagattagagatttgtctgaagaaatagagctggataaaaataaaaaacat
gatatagaagccgtagtagaccggttggtggttggtcaggcaggtgggcaggggcggatt
gcagattcggttgaaactgccctgaaactgggcggcgggctggtaataatatctgtggta
gacgggcaggatatgcttttttcagaaaaattttcctgtgctgactgcggggtaagtctg
ggtgagatagaaccccggactttcagctttaataccccccacggtgcctgtccaacttgt
atgggacttggtgccaagatggagcttgaccctgatttaatcataccggacaagagcttg
tctctggctgacggggctatcagcccatatcaaactcaaaactggtatttcgggcaggtg
gaagatttagcccgccgggcgggtttttcggttaataaacctgtctctacttttactccc
gcccagatgcaggtactgctttatggtgagggcggtgagattcataaataccgcaaccgt
tacgggcgggtacgggaatataccagcggttttgaggggattataccccgtctggatagg
ctttatcgtgacagcgaatctcagggggtaagggaaagcattgaaaaatacatgctggcc
agcccgtgccaggcctgcggcggtaaaaggcttcgcaaggaagccttgtcagtaaaaata
ggcgagcttaatattgctgatgttgcggccatgtctgtagatgagcagtttaagtgggca
aatgaactggctggcaagaataccatatttaacaaacgcgaacagcttattgccgcccag
atactcaaagagatacgttcacgtttgggttttttaaacaatgtaggtttggaatacctg
actgtagaccgtattgccggcacgctttccggcggtgaagcccagcggatacgtctggca
tcccagataggctcagggctgatgggggtgctgtatgtttgtgatgaacctactataggc
ttgcatcccgcagatgatacccgtctggtggaaaccctgcaaaagctgcgtgatttgggc
aataccatactggtagtggagcatgatgaatccgtgatgcgggcagcggactatattata
gatatggggccgggggcaggtgaacacggcgggcgggtagtggctaccggtaatattacc
gaaataatgcaaaacccggcttcgctaaccggtcaatatctttcgggtgttaaggtcatt
cctgttcccgaaaaacggcgggacggtaacggacaggaaatagtagtattgggtgcccgc
cagaataacctgaaaaatatagacgtacatattccgcttggcaagctggtctgtgtcagc
ggcgtatctggtagcggcaaatccacactggttaccgatatactttttaaacatctggcg
caggtattttacggggcaaaagaccgggcgggcggagcggatgctataaccggcacggaa
catattgataaaataatagagattaaccagtcacccatcgggcggacaccccgttcaaat
ccggccacctataccggggcatttacccatataagggaactgtttgcctctgtgcctgaa
gccaaagtgaaaggctacggaccggggcggttttcatttaacataaaaggcggccgctgc
gagacctgcggtggtgagggttatatccagatagaaatgcagttcctgccggatgtgact
gtgccctgtgaggtctgtcacggggcgcgttataaccgtgaagtgctggagataaaattt
aaagacaagaccattgccgatgtgctggatatgacggtggacagggcactggaatttttt
gaaaatttccccaaaattagttccaagctccaaacattgcaggacgtgggtttgggatat
atccgcatcggccagccggcacccaccttatccgggggtgaagcccagcgcatcaagctg
gcaaccgagctttccaagcgggctaccgggcggactttatacatattggacgaacctacc
accgggctttcttttgaagatgtggcggcgcttttgcgggtgctccagcggctggtggac
agcggcaatacggtggttgtgattgaacaccagctggacgttattaaaaatgccgactgg
attatagacctggggccgggtgcgggcgtaaaaggcgggcagattgtggctgagggcatt
cctgaggagattgccttaaacaaagcttctgtgacaggtaaatacctaaggcgggttttg
ccgaaaattaaaccggcttaa
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