Dehalococcoides mccartyi GY50: GY50_0475
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Entry
GY50_0475 CDS
T02938
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dmg
Dehalococcoides mccartyi GY50
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmg03400
]
GY50_0475 (sbcC)
DNA repair and recombination proteins [BR:
dmg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GY50_0475 (sbcC)
Archaeal homologous recombinant proteins
GY50_0475 (sbcC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AHB13258
LinkDB
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Position
complement(428821..431400)
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AA seq
859 aa
AA seq
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MIPVKLRIKNFMCYRGEIPPFSFNGVHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVVSLNEQETEVSLDFEISGELYQVIRQRQRPKKTGANGQSLLSLFSIKDGKPLNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLSNILGLEIYDQLEDL
ARQAVREAEAKKLLIEQSIADGQEGLKSRPELEEALKNTRLSLTDGEEKLKTHIAKLEIL
RHKKHAFDAKQSACLQIEKDLRDISKDQSLWAQNQQDIKQRISMFESLSARKDEILKGFQ
EYTACQSLYEKHNRVLAKLRQLESSKKPFEDAVYKEENSLKNILTKYQEHLKMRQETAQT
LSRLEQEKKQSDLMHLELENEETVLKIKQTKLAEMQGSLAGLETEYAGTAREINSLEEKL
KLLIEASESRCNCPLCETELGQDKLKLVFGKYRTEQDAKGKQQSSLKLKLEQLRLDIQTL
TAQIETETKRLNQKRRQYEGQLSVLEKGIADAKDAGTKAAKGRELISDIEKQLNERSYAV
SEQARLAVIEKEILELNFDNAEYTQNQQTLAGLTHFEEQKRKLDEAQSRLPIERDSLEKT
TSALAELTARHDTKLSEQQTLQRELTELPALEQELETAEAGYKLLSQTQDTLRQQLGSLS
QKEEQLNELEKKLKKQEQDKEQTAKEIYYFGKLARAFGKKDGIQTMLIEDTLPELESGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAVRI
ALSRLLANRLGAPLRTLIIDEGFGTQDSTGIERLKEAINSIQDEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcagaataaaaaactttatgtgctaccgcggcgaaattccgcct
ttttcttttaatggggtgcataccgcctgcatctgcggccaaaacggggcaggtaaatcc
gccctgatagatgccattacctgggcactctggggaaaaagccgggctaaaagtgatgat
gatgtagtgtctctaaacgaacaggaaactgaagtcagcctagattttgagatttcgggt
gaactttatcaggttatccgccaacgccaacgccccaaaaagaccggagcaaacgggcaa
agccttttaagcttgttttccataaaggatgggaaacccctgaatatcaccggggatacc
ctgacccaaacagagaaaaagataatttccatactgcatatggactatgacacctttata
aacagtgcttttctgcggcaagggcatgccaaccagtttacccagcagccccccggcaaa
cgcaaggaagtactctctaatatactggggttagaaatatatgaccagctggaagacctg
gccagacaggccgtacgcgaggcagaggctaaaaaactgcttatagagcagagtattgca
gacggccaagaagggctgaaatccagaccggaactggaagaagctttaaaaaatacccgc
ctgagcctgacagacggtgaggagaaactgaaaacccatattgccaagctggaaatcctc
aggcataaaaaacatgcctttgatgccaaacaaagtgcctgcctccagatagaaaaagac
ctgcgggacatatcaaaagaccagtcactttgggcacaaaatcaacaggatataaaacag
cgtatcagcatgtttgaatcactctctgcccgaaaggatgaaatccttaaaggttttcag
gaatacaccgcctgccaaagtctgtatgaaaaacacaatcgcgtactggcgaaactaaga
cagttggaaagttccaaaaaaccctttgaagatgccgtttataaagaggaaaacagcctg
aaaaacatcctgactaaatatcaggaacatctcaaaatgcggcaggaaaccgcccaaacc
ctgagcaggctggaacaagaaaaaaaacagtcagacctgatgcacctggaactggaaaat
gaagagactgtcttaaaaatcaagcaaaccaagctggcagagatgcaaggaagtttagcc
ggactagagaccgagtatgccggtacagccagagaaataaactctctggaagaaaaacta
aaactgcttatcgaagcaagtgaaagccgctgcaactgccccctgtgcgaaaccgagctg
gggcaagacaaactcaaactggtattcggcaaataccggacagaacaagatgctaaggga
aaacagcaaagcagcctgaaactaaagcttgagcagctgaggctggatatccagacttta
actgcccaaattgaaactgaaaccaaacgcttaaaccaaaaacgcaggcagtatgaggga
cagctgagcgtactggaaaaagggattgcagacgccaaagatgccggaaccaaagcggca
aaaggcagagagctgatttcggatattgagaagcagctgaacgaacgcagttatgccgtt
tccgagcaagccaggctggcagtaattgaaaaagagatactggaactgaattttgataat
gccgaatacacccaaaaccagcaaactttggccggcctgacccactttgaggaacaaaaa
cgcaaactggacgaggcacaaagccgcctgccgatagaaagagatagcttggaaaaaacg
acttcggcactggcagaactcaccgcccgccatgatactaaactgagtgaacagcaaacc
ctgcaaagagaactgactgaactgcccgcactggagcaggagctggaaaccgccgaagcc
ggatacaagttactcagccaaacacaggataccttgaggcaacaacttggttcgctcagc
cagaaagaagaacagttgaatgaacttgaaaaaaagctgaaaaaacaggagcaggataaa
gagcaaaccgccaaagaaatatactactttggtaaactggccagagctttcggcaagaaa
gacggcatccagaccatgctcattgaagacaccctgcccgaactggaaagcggggcagac
ctgctgctgtcacggatgactgacgggcgtatgcatctgagcatagaaacccagcgttcc
accaaaaagggagaccagaccgagacgctggatataaatatctcggatgagctgggcacc
cgcaactacgaaacattcagcgggggtgaggctttcaggatagattttgcggtcaggatt
gccctgtcacgcctgctggcaaaccgtctgggcgcacccttgcggacgctgattattgat
gaaggcttcggcacacaggactcaaccggtattgaacgcctgaaagaggctataaactct
attcaggatgagtttgacaagatactggtcataacccatatagatgacctgaaagattct
ttccccacccgcattgagatagataaaaccccgtcaggctcagctatacgcttaaactaa
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