Dehalococcoides mccartyi GY50: GY50_0476 Help Entry GY50_0476         CDS       T02938                                  Symbol rpoD Name (GenBank) RNA polymerase sigma factor   KO K03086   RNA polymerase primary sigma factor Organism dmg  Dehalococcoides mccartyi GY50 Brite KEGG Orthology (KO) [BR:dmg00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     GY50_0476 (rpoD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dmg03021]     GY50_0476 (rpoD) Transcription machinery [BR:dmg03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      GY50_0476 (rpoD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 CENP-B_N Motif Other DBs NCBI-ProteinID:  AHB13259 LinkDB All DBs Position complement(431574..433136) Genome browser AA seq 520 aa AA seqDB search MPAEKDKKEFSPDDIDDDKDVEQGLADIHDEQDAEAESDKLVEPDLKDIADTDIPAELTE EELAAEADMMPDTDEEIGPLNIDLEIPLEQVDTQGIVDDPVRMYLHEIGRVPLLSAEDEK TLAKKMEEGKRIREIRQECLEKRGRYPSAAESFLCMLRELAQATEVLFQLGQELKVDTSA SLKTIIHNPKLRAAIDHEIDQQLTKNISDNTGKSMAEIEQAFINLAINSSLLPKVVLDAI PEKMTIPEISDHTNDPAFISHLERHEASLKYYLDNLEIDAKRAERHLIQANLRLVVSVAK KHIGRGMPLLDLIQEGNIGLIRAVEKFDFHRGFKFSTYATWWIRQAITRAIADQARTIRI PVHMVETINKLLSISRQLSQKLGREPTPDEIALEMDLPPEKVREIAKVSQLPVSLESPIG EEEDSHLGDFIEDQNALAPPDAASRQLLKEQIDTVLGSLTPRERRVLQLRFGLEDGRSRT LEEVGKEFNVTRERIRQIEAKALRKLRHPSRSRKLKDYLE NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt atgccagctgagaaagataagaaggaatttagccctgacgatatcgatgatgataaagat gtggaacaggggctggctgatatccatgacgaacaggatgccgaagcagaaagtgacaaa ctggtagagcctgacctcaaagatatagccgataccgacataccggccgaactaaccgaa gaagaactggcggccgaagcggatatgatgccggacacagatgaagaaatcggcccgctt aatattgaccttgaaataccccttgagcaggttgatacccagggtatcgtagatgacccg gtacgcatgtatctgcatgaaatcggcagggtacctttgctttccgccgaagacgaaaaa accctggctaagaaaatggaagaaggcaaacgcatacgtgaaatccgtcaggagtgcctt gaaaaacgcggacgctacccctcggctgcggaatctttcctgtgcatgctgagagagctt gcccaagctaccgaggtgcttttccaactggggcaggaactaaaggtggatacttctgcc agtctgaaaactattatccacaaccccaagctaagggcggctattgaccatgagattgac cagcagcttaccaaaaatatctccgataataccggcaagagcatggcggagattgagcag gcatttatcaatctggctataaacagctcccttctgcccaaggttgtgctggatgccata cctgaaaaaatgaccataccggaaatatcagaccataccaacgaccctgcctttataagt cacttggaacggcatgaggccagcctgaaatattatctggataaccttgagatagatgcc aaacgagctgaacgtcaccttattcaggctaaccttcgcctggttgtcagcgtagcaaaa aaacacatcggcagaggcatgcccctgcttgacctaatacaggaaggcaatatcggcctt atacgggcagtggaaaaatttgatttccaccgcggcttcaagttttccacttacgccaca tggtggatacgtcaagcaattacccgggctattgcagaccaggccaggactattcgcata cctgtccatatggtggaaaccatcaacaagctgctgtccataagccggcagctgtcacag aagctggggcgtgaacctaccccagatgagatagcccttgaaatggatttgccgcctgaa aaggtacgtgaaattgccaaggtatcccagctgccggtttcgctggaatcccctataggc gaagaggaagatagtcatctgggagactttattgaagaccagaacgctctggctccgccg gatgccgcttcgcgccagctgctaaaggagcagatagatacagtactgggcagcctgact ccgcgtgaacgccgggtacttcagctccgctttggtctggaagacggccgaagccgtaca ctggaagaagtgggcaaagaatttaatgtaacacgtgaacgtatccgccaaatagaagcc aaggctctgcggaaactccgccaccccagccgcagccgcaaactgaaagattacctggaa taa

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