Dehalococcoides mccartyi GY50: GY50_0512
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Entry
GY50_0512 CDS
T02938
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dmg
Dehalococcoides mccartyi GY50
Pathway
dmg03030
DNA replication
dmg03430
Mismatch repair
dmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GY50_0512 (dnaX)
03430 Mismatch repair
GY50_0512 (dnaX)
03440 Homologous recombination
GY50_0512 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmg03032
]
GY50_0512 (dnaX)
03400 DNA repair and recombination proteins [BR:
dmg03400
]
GY50_0512 (dnaX)
Enzymes [BR:
dmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GY50_0512 (dnaX)
DNA replication proteins [BR:
dmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GY50_0512 (dnaX)
DNA repair and recombination proteins [BR:
dmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GY50_0512 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_22
AAA_5
Rad17
AAA_19
DnaX_C
Glyco_tranf_2_5
AAA_16
DUF815
AAA_2
AAA_18
DUF4439
PCI
Motif
Other DBs
NCBI-ProteinID:
AHB13295
LinkDB
All DBs
Position
complement(461787..463475)
Genome browser
AA seq
562 aa
AA seq
DB search
MADMTCQVFYRKWRPQTLADLVGQEHVAHTLKNALSSGRIAQAYLFCGPRGTGKTSTGRI
LAKAVNCTTNQGKGEPCNTCPMCLSITEGSSMDIIEIDAASNTGVDDIRELKEKVQYSPS
LANYKVYIIDEVHMLSNSASNALLKTLEEPPPRVIFILATTEIHKVLPTIMSRCQRFDFH
RVSLSDMTRKLEKISKAEDINIEPEALKLITRSAGGSFRDGENLLQQIATTYGAEISLSQ
VQAALGISGDERIKTLAENILKKDIKNGLKTLNAVVADGLDLKQFRRELLDYLRQVMLVN
SGAESSLELTTDEKKALQKVSAITNLEGITKAIKAFSQLDFSSDTASSLSFELALVDASL
NPDTAPATILPQAELPASKAEKPAVSNEPPQKEAQTETQDKTKNASEPAAASKPHAKESA
PKLTRAAIPIDEKPKYTASAQPKEEEKVLIGAGDVIEQLKVSWKNILDQAPDNLKRSAAV
AILRSAGVRPVSIEKNVVTLSFKYKYHKDKIEELENRKVTAEIISNFVGKTCTLVCISEA
ETNHLVKEAQKLGAQIISVEEK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatgacctgtcaggtattttaccgcaaatggcgcccccagactctggctgac
cttgtcggccaggaacacgttgcccacaccctgaaaaatgccctttcaagcgggcgtatt
gcccaggcataccttttttgcggtcccagaggcaccggcaaaaccagcaccggacggatt
ttagccaaagcggttaactgcaccactaaccagggcaagggcgagccctgtaatacctgc
cctatgtgtctttcgattaccgaaggcagttccatggacataatagaaatagatgctgcc
tccaacaccggggtagacgatatccgcgaactcaaagaaaaagttcagtattcaccgtca
ctggcgaactacaaggtttatatcatagacgaagtccatatgctttccaacagtgcctca
aacgcactcctgaaaacgcttgaagaacccccgccaagggttatatttatactggccact
acagaaatccacaaggttttaccgactattatgtcccgttgccagcggtttgatttccac
cgggtatccctttcggatatgacccgcaaactggaaaaaataagcaaggcagaggatata
aatatagaaccggaagccttaaaactgataacccgttcggcaggcggcagtttccgtgac
ggtgaaaacctgctccagcagatagccaccacttacggtgcggaaataagcctgtcccag
gtacaggcggctctgggtatcagcggagatgaacgcataaagactttggctgaaaatatc
ctcaaaaaagacattaaaaacggactaaaaacccttaatgccgtagtagctgacgggctt
gatttaaaacagttccgccgtgaactgctggattacctgcgacaggttatgctggtaaac
agcggagcggaaagcagtttggaacttaccacagatgagaaaaaagccctgcaaaaagtg
tcagccataaccaacctggagggtattaccaaagctataaaagccttcagccagcttgat
ttcagctcagatacggcctccagcctgagttttgagctggcactggtagatgcttcgctt
aatccggatactgcacctgctactatactcccccaggccgaattaccagcctctaaagct
gaaaaaccagcggtatctaatgagccgccgcagaaagaagcccaaacagaaacccaggat
aaaaccaagaatgcttcagaaccggccgctgcttccaagccgcatgccaaagaatctgcc
cccaaacttaccagagcggccatacctattgacgagaaacccaagtacaccgcttctgcc
cagcccaaagaagaagaaaaagtgcttatcggagccggagatgtgattgaacagctaaag
gtcagctggaaaaacatacttgaccaggcaccggacaatctcaaacgttcagcggcggta
gccatactccgcagcgccggtgtccgcccggtctctatagaaaaaaatgtggtcaccctg
tcttttaaatacaaataccacaaagacaaaattgaagaactggaaaaccgcaaggttaca
gccgaaattatttcaaacttcgtcggcaagacatgcactctggtatgcatatccgaagcc
gaaaccaaccatttggtaaaagaagcccaaaaactgggtgcccagattatatcagtggag
gaaaaataa
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