Desulfosporosinus meridiei: Desmer_0008
Help
Entry
Desmer_0008 CDS
T02207
Name
(GenBank) pyridoxal phosphate synthase yaaD subunit
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi00750
Vitamin B6 metabolism
dmi01100
Metabolic pathways
dmi01240
Biosynthesis of cofactors
Module
dmi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Desmer_0008
Enzymes [BR:
dmi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Desmer_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
His_biosynth
FMN_dh
NanE
IGPS
OMPdecase
NMO
Motif
Other DBs
NCBI-ProteinID:
AFQ42118
UniProt:
J7ISM7
LinkDB
All DBs
Position
9552..10436
Genome browser
AA seq
294 aa
AA seq
DB search
MTDIGSFKVKTGLAEMLKGGVIMDVTTPEQAIIAEEAGACAVMALERVPSDIRAEGGVAR
MADPSIIQSIMAVVSIPVMAKARIGHFVEARILEALGADYIDESEVLTPADDSYHINKHD
FKVPFVCGCRNLGEALRRIGEGAAMIRTKGEPGTGNVIEAVRHMRTVMSEIRALTLTPKE
ELMSAAKNMGAPYDLVLYVAEHGKLPVVNFAAGGIATPADAALMMHLGVDGIFVGSGIFK
SGDPKARAKAIVMATTHYKDAKLLAEISKDLGQPMSGIEISTLTESQRMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcggttcgtttaaagtgaaaacaggacttgcggaaatgcttaaaggggga
gttattatggatgtaacaaccccagaacaggctattattgcagaagaggctggagcatgt
gctgtcatggctctagagcgcgttccttcagatattcgtgcagaaggcggagttgcacga
atggcagatccatcaataattcagagcattatggctgtagtgtctattccagtcatggct
aaggcaagaattggtcattttgttgaagctcggattttagaagccttaggcgctgattat
attgatgagtctgaagtgctaacacctgcagatgattcttatcatattaataagcatgat
tttaaagttccttttgtttgtggatgtcggaatctaggggaagcattacgccgtattggc
gaaggtgccgccatgattcgtacgaagggtgagcctggaacaggtaacgttattgaggca
gttcgacatatgcgaactgttatgagtgaaatacgtgccttaaccttaactcccaaagag
gagcttatgtctgcagctaaaaatatgggtgcaccctatgatttagttctttatgttgca
gaacacggcaagctacctgtcgttaattttgctgcaggaggaatagcaacaccggcagat
gcagcattgatgatgcatttaggagtagatggtatttttgtaggatctggtatttttaaa
tccggtgacccaaaagcacgagccaaagctattgtaatggcaacaacacattacaaagat
gcaaaattgcttgcagagatttctaaggatttaggacaacctatgtctggaattgaaata
tcaaccttgactgaatctcagagaatgcaagaacggggttggtaa
DBGET
integrated database retrieval system
