Desulfosporosinus meridiei: Desmer_0276
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Entry
Desmer_0276 CDS
T02207
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dmi
Desulfosporosinus meridiei
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmi03016
]
Desmer_0276
Enzymes [BR:
dmi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Desmer_0276
Transfer RNA biogenesis [BR:
dmi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Desmer_0276
Prokaryotic type
Desmer_0276
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF2505
Motif
Other DBs
NCBI-ProteinID:
AFQ42338
UniProt:
J7ITC5
LinkDB
All DBs
Position
253767..254549
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AA seq
260 aa
AA seq
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MRNIRLRLAYDGTHYHGFQRQDKAYGPTIQGTLESVWAKLVEEEVTLAMAGRTDAGVHAS
GQVVNYSTSARIPEEKIPKAFNSLLPKDIRVLEAECVADDFNSRWSARWKRYDYLIDNKP
IPDTFQRLYAYHVPLPLNTDHMQQAAIYLEGCHNFKTFAAAGGDSKRFERTIYRCKVSRE
DKGMIRVTCIGDGFLYHMVRIIVGTLVDVGRGRILPGEIPDIIASQERRRARMVAPAHGL
TLVHVNYTNESPSTVFEELF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacattcgcttaagattagcctatgatggaacacactaccatggctttcagcgc
caagataaggcatatggacctacgatacagggaactctagagtctgtatgggctaagctc
gttgaggaagaggtaactcttgctatggctggacgaacagatgcgggagtacatgcctcc
ggacaagtcgtgaattattcgacaagtgctagaattccagaagagaaaatccctaaggca
tttaatagcttgcttccgaaagacattcgtgtacttgaggcagaatgtgtagcggatgat
tttaattcacggtggtctgccagatggaaacgctatgactacttaattgataataagccg
attccggatacgttccagcgactttatgcatatcacgttcctctgcctttaaatacagac
cacatgcagcaggcggctatctatttagaaggatgtcataatttcaaaacctttgcggct
gctggtggggatagcaaaagatttgaacgcacaatttatagatgcaaagttagtcgtgag
gacaagggaatgattagagtaacctgcattggggatggatttttgtaccatatggtaagg
attatcgttggaacacttgttgatgtgggaagaggtcgtattctgccaggagagattccc
gacataatagccagtcaagagcgtagacgtgctcgcatggttgctcctgcccacgggcta
actcttgtgcacgtaaattatacaaatgaaagcccaagtactgtttttgaagagttattc
tag
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integrated database retrieval system
