Desulfosporosinus meridiei: Desmer_0725
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Entry
Desmer_0725 CDS
T02207
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desmer_0725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmi03019
]
Desmer_0725
03110 Chaperones and folding catalysts [BR:
dmi03110
]
Desmer_0725
03029 Mitochondrial biogenesis [BR:
dmi03029
]
Desmer_0725
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmi04147
]
Desmer_0725
Enzymes [BR:
dmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Desmer_0725
Messenger RNA biogenesis [BR:
dmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Desmer_0725
Chaperones and folding catalysts [BR:
dmi03110
]
Heat shock proteins
HSP60 / Chaperonin
Desmer_0725
Mitochondrial biogenesis [BR:
dmi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Desmer_0725
Exosome [BR:
dmi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Desmer_0725
Exosomal proteins of other body fluids (saliva and urine)
Desmer_0725
Exosomal proteins of breast cancer cells
Desmer_0725
Exosomal proteins of colorectal cancer cells
Desmer_0725
Exosomal proteins of bladder cancer cells
Desmer_0725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
AFQ42757
UniProt:
J7ILU1
LinkDB
All DBs
Position
748941..750581
Genome browser
AA seq
546 aa
AA seq
DB search
MAKQIIFNQDARHALERGVNALAEAVRVTLGPKGRNVVLDKKFGSPLITNDGVTIARDIE
LEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVAAGANPMGIKRGIE
QAVEVVVADIKANAKLVETSEAIAQVASISASDKTIGDLIAQAMEKVGKDGVITVEEAKG
MTTELEVVEGMQFDRGYISAYMITDTEKMEAVLNDPFILITDKKISAIQDVLPVLEKVVQ
AGRQLMIIAEDIDGEALATLVVNKLRGTFVCVGVKAPGFGDRRKAMLEDIAVLTGGTVIT
EDLGLKLENTTLEMLGRSRQVRVTKEETTLVEGSGNPEDIKKRVEAIKRQIDETTSDFDR
EKLQERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALAATRAAVEEGIVSGGGTTLIDA
IQALDKLSLTGDEATGVSIVRRALEEPLRQIANNAGHEGSVVVGKVRESGTRGIGFNAVT
EVYEDMIAAGIVDPAKVTRSALQNAGSIAAMLLTTECLVSDLPSKDGGAGAMPGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagcaaattatttttaatcaagacgctcgtcatgctttagaacgcggtgttaat
gctctagctgaagctgttcgcgtaactttaggacccaaaggacgtaatgtcgttctcgat
aagaagttcggatctcccctgatcactaatgatggggttaccattgcacgtgacattgag
ttagaagatccatttgaaaatatgggagctcagcttgtcaaagaagttgctactaaaacc
aatgatgttgccggagacggtacaacaacagctacagttttggcccaagctattattcgt
gaaggccttaagaatgttgcagcaggtgctaacccaatgggcattaaacgtggaattgaa
caagcagttgaagttgttgtggctgacatcaaagctaatgctaaactcgtagaaacaagt
gaagctattgctcaagttgcctctatctccgctagtgataaaaccattggtgatctgatt
gctcaagctatggaaaaagttggaaaagacggcgttatcactgttgaagaagcaaaaggg
atgaccactgagcttgaagttgttgaaggaatgcagtttgatcgcggttatatttccgct
tatatgattacagacacagaaaaaatggaagctgtactcaatgatcctttcattttaatc
actgataagaaaatcagtgcaattcaagacgttttacctgtccttgaaaaggtagttcaa
gctggccgccaactaatgataatcgctgaagatatcgacggagaagctctggctactctc
gtagttaacaaacttcgcggaacctttgtttgcgttggtgttaaagctcctggctttggt
gatcgccgtaaagcgatgctcgaagatatcgcagttctaacaggtggaactgttatcact
gaagacttaggtcttaaattagaaaacacgactcttgaaatgctcggacgttcacgccaa
gtccgcgtaaccaaagaggaaactacacttgttgaaggatcgggaaaccccgaagacatc
aagaagcgcgtagaagctattaaacgtcagatcgatgagacaacttctgacttcgatcgt
gaaaagctccaagagcgcttagcaaaattagcaggtggggttgcagttatccaagttggt
gctgctactgaaactgaaatgaaggagaagaaactccgcattgaagatgctttagctgct
actcgtgctgctgttgaagaaggtattgtatccggtggaggtactactctgattgatgca
atccaggctttggataaactcagcttaactggggacgaagcaactggtgtaagtattgtt
cgtcgtgctctcgaagagccccttcgtcaaatcgccaataacgccggacatgaaggttcc
gttgttgttggaaaggttcgcgaatccggtacaagaggaatcggcttcaatgctgtaaca
gaagtctatgaagatatgattgctgccggtattgttgatccggctaaagttacccgttca
gctctgcaaaatgccggttcgattgctgcaatgctcttgaccactgaatgcttagtctct
gacctgccttcaaaagatggcggagcaggtgctatgcctggtggcatgggtggaatgggt
ggcatgggcggcatgatgtaa
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