Desulfosporosinus meridiei: Desmer_0745
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Entry
Desmer_0745 CDS
T02207
Name
(GenBank) putative domain HDIG-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dmi
Desulfosporosinus meridiei
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmi03019
]
Desmer_0745
Messenger RNA biogenesis [BR:
dmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Desmer_0745
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HDOD
tRNA_anti-codon
Cas3_HD
DinB
MLTR_LBD
Motif
Other DBs
NCBI-ProteinID:
AFQ42777
UniProt:
J7ILW3
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All DBs
Position
771252..772181
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AA seq
309 aa
AA seq
DB search
MLKDCNAGERFEGVLLINEWKEVPFRQKPGAYLSLTCQDSSGQMQGKMWNYDPQVLVLLK
DQDIVRIKGVASEYRGTLDLTIETIKIVAEEDVDLSELLPSSPIAASELEKRLTVLIEKT
SQRELRALLEQVFGHPEWGDAFRKAPAAMKVHQAYLRGLWEHSVRVAELVEEIAKYYPKM
NRDLAVTGALLHDLGKIGEYNYERGIKFTTEGRLLGHIILGIELLTEEITKISDFPRELR
SKLLHIITSHHGKYEWQSPKRPKLMEALVIHYADALDAELYQFEQAKENHPEDEWSPYIP
SMERYIYLK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagactgtaatgctggggaacgatttgaaggggtattgctgattaatgagtgg
aaagaggttccatttcggcaaaaaccgggggcatatctctccttgacatgccaagatagc
tctgggcagatgcaaggaaaaatgtggaactacgatccccaagttctcgtgctgctaaaa
gatcaggatatagttaggattaaaggggttgcttctgagtaccgtggtactctggatcta
acgattgaaacaattaaaatagtagctgaagaagacgtcgacttatcagaacttttgcct
agttccccgattgcggcttcggaattggagaaacgcctaacggttctgattgaaaagact
agccaacgggaacttagggctttgctggaacaggtttttggacatccggaatggggggac
gcgtttagaaaagcacctgccgccatgaaggtccatcaagcatacttgcgcgggctttgg
gaacacagtgttagagtagctgagcttgttgaagaaattgccaagtattaccccaaaatg
aatcgagatttagctgtaacaggtgcccttttacatgacttggggaaaattggtgagtac
aattatgagcgcggaattaaatttacaacagaaggaaggctactggggcacattatctta
ggaattgaacttctaactgaggaaattaccaagatttccgacttcccgcgagaattgagg
tctaagttgttgcatatcattacaagtcatcatggtaaatatgaatggcaatccccaaaa
cgtccgaaattgatggaagccttagtaattcactatgctgatgctttggatgctgagctt
tatcagtttgaacaagcaaaagaaaaccaccccgaagatgaatggtcaccatatatccct
agtatggagcggtacatttatttaaaataa
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