Desulfosporosinus meridiei: Desmer_1418
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Entry
Desmer_1418 CDS
T02207
Name
(GenBank) ABC-type uncharacterized transport system, periplasmic component
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desmer_1418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmi02000
]
Desmer_1418
Transporters [BR:
dmi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Desmer_1418
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Phage_lipoprotein
LPAM_MltD
Motif
Other DBs
NCBI-ProteinID:
AFQ43411
UniProt:
J7IXH4
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Position
1488839..1490101
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AA seq
420 aa
AA seq
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MRKVTTPVITIIVIAICLFLAGCSQAQNKSDPAAAATSTDLLKANWDEVASQAKGQTVNM
YMWGGSESINRYMDEWVAPRLKEDYEVTLHRAPVNDINDTVNKLLAEKQVNKKEGSVDLI
WINGENFKNAKEQDLLWGSFDKQLPNFNQYIDANAPDIKDDFGLPTEGLEAPWGKAQFVF
IYDSNKIKTPPTSLAQLADWVKQNPGKFTYPAPPDFTGSAFIRQALYETTGGYQQYMKPL
DADSLTPKLSPLWNYLNSMETSLWREGKTYPESLAKLDQLYANGEVWMTMGYDPARASNE
IKKGTFPASTRTFVLEAGTLANTHYLSIPFNSTHQAGAMVAINFMLSPEAQIAKFDPLNW
GEDMSLDLEKLSPEDQRLVSEIDRGIATLPAGELASHRLPELPSAYVDVLDNGWLEYVAK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagtaaccactcctgtaataacaataatagtcatagccatttgtttatttttg
gccggctgttctcaggctcagaataaaagtgatcctgccgctgccgccacttcaacagat
ctcttaaaggccaattgggatgaggtggcaagccaggctaaagggcaaacagttaacatg
tatatgtggggtggaagtgaatcaatcaaccgttacatggatgaatgggttgccccccgg
ttaaaagaggattacgaagttaccttgcatcgtgcaccggtcaatgatattaacgacact
gtcaataagctgcttgccgaaaagcaggtcaacaaaaaagagggcagtgtggatctgatc
tggatcaacggtgagaattttaaaaatgctaaggaacaggatctgctctggggttctttc
gataagcagctgcctaattttaatcaatatattgatgctaatgccccggatataaaagat
gatttcggcttacctacggagggcttagaagcaccctggggtaaagctcaatttgtcttt
atttatgattccaataaaataaagactcctccaacttccctggctcagctcgctgattgg
gttaagcaaaacccaggcaagtttacttatcctgctcctcccgattttacggggagcgcc
tttatacgtcaggccttatatgaaacgacaggtggttatcagcaatacatgaaacccctg
gacgcggatagccttacccctaaactctcccctctctggaattacctgaactccatggag
acttctttatggagagaaggaaagacttatccggaaagcttagccaaactggatcagctt
tatgccaatggcgaggtctggatgaccatgggatatgatccggctagggcatctaatgag
attaagaagggaaccttcccggcgtccacccgtacctttgtgcttgaagcaggtacactg
gccaatacccattatctatccatcccttttaactccacccaccaagcgggggcaatggtg
gccatcaattttatgctttctcctgaagcccaaattgccaaattcgacccgcttaattgg
ggggaagatatgtccttggacctcgagaaactatctccggaagaccaaagactagtttcc
gagattgatcgagggattgctactttaccggcaggagaattggccagtcatcgcctccct
gagttacccagcgcctatgtagatgttcttgacaatggttggctggaatatgtggcaaaa
tag
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