Desulfosporosinus meridiei: Desmer_1421
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Entry
Desmer_1421 CDS
T02207
Name
(GenBank) ABC-type spermidine/putrescine transport system, ATPase component
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desmer_1421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmi02000
]
Desmer_1421
Transporters [BR:
dmi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Desmer_1421
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
Rad17
AAA_22
AAA
CysA_C_terminal
SbcC_Walker_B
AAA_29
AAA_25
AAA_5
Mg_chelatase
AAA_30
NACHT
AAA_16
ATPase_2
RsgA_GTPase
nSTAND1
nSTAND_NTPase5
AAA_14
NB-ARC
ORC-CDC6-like
TsaE
NPHP3_N
AAA_33
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AFQ43414
UniProt:
J7ITC4
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Position
1491917..1492999
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AA seq
360 aa
AA seq
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MNHLCLKGVEKGYYHSDSDSFELNIPQLTIQEGELLALLGPSGCGKTTLLKVVAGLLEPD
RGEVLLGDQTISKIPTEKRGLGMVFQQALLFPHMRVEENVAFGLKMKGIPKGVRLEKARL
MLKAVGLSGFGDRFPSELSGGQQQRVSLARAMVSCPQVLLLDEPFSSLDPELREEMRDLL
KGLQQDYKLTTLLVTHDVNEAFVLADKIGIMKQGRILQMDQPQILYENPNSPEIALFLGA
RNVIYGQLSQGVFRAGSFKLAVPGKEELYQQSGWIVLRPENLKLCSVPASTKSSPTNRDL
ILRGSVEKSVFSQGSYHVTVQIESQSVNLSFPADQSSKPGLGEALELTYDPQSLVFIPEY
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatctttgtttaaagggagtcgaaaaaggttattaccactccgactcagattct
tttgagttgaatataccccaattgaccatccaagaaggagagcttttagccttgctgggc
ccttccggctgcgggaagacaactctgctcaaggtggttgccggcttgctggaaccggat
aggggggaggtcttgcttggtgatcaaactatcagtaagatcccgacagaaaaaaggggc
ttgggaatggttttccaacaagctttgcttttcccccatatgagggtggaggagaacgtt
gcttttggtttgaaaatgaaaggcatccctaaaggtgttcgactggaaaaggccagattg
atgcttaaagcagttggactttccggttttggagatcgctttccttccgagttaagcgga
gggcagcaacagcgtgtatctttggccagagcaatggtgagctgcccccaggtgctttta
ctggatgaaccctttagttcccttgatccggaactgcgggaggagatgcgggatttgctc
aaaggattacaacaagactataagttaaccaccttgttggtaacccatgatgttaatgaa
gcttttgttctggctgataagatcggaattatgaagcaggggcgaatattgcaaatggat
caacctcagatactctatgaaaaccccaatagcccggagatcgctttatttttaggggct
agaaatgttatctatgggcaactatcccaaggggtattccgagcaggttcatttaaatta
gcagttccgggaaaagaggaactctaccaacagtcgggttggatcgtgcttcgacccgag
aacttgaaattatgctctgtcccggcaagcactaaatccagtccaacaaacagggattta
attctgagaggcagcgtcgaaaaatctgttttttctcaagggtcttatcatgtgacggtt
cagatagaatcacaatcagtaaaccttagcttcccggcagatcagagttcaaagccaggt
ttaggagaagctcttgagttaacctacgatccacagtcattagtttttatcccggaatac
tga
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