Desulfosporosinus meridiei: Desmer_1734
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Entry
Desmer_1734 CDS
T02207
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dmi
Desulfosporosinus meridiei
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmi03032
]
Desmer_1734
03400 DNA repair and recombination proteins [BR:
dmi03400
]
Desmer_1734
Enzymes [BR:
dmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Desmer_1734
DNA replication proteins [BR:
dmi03032
]
Prokaryotic type
DNA Topoisomerases
Desmer_1734
DNA repair and recombination proteins [BR:
dmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Desmer_1734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SHS2_Rpb7-N
Motif
Other DBs
NCBI-ProteinID:
AFQ43706
UniProt:
J7IYC5
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Position
1828735..1831149
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AA seq
804 aa
AA seq
DB search
MSITEDNIIQRPLEDVLPESFLGYSKHVILQRAVPDVRDGLKPVHRRILFSMDEIGMHTD
KPYSKSARLVGDCMGKYHPHGDSSIYESAVRMAQPWATRYPMVDGQGNFGSIDGDNAAAM
RYTEMRMTPLSQLMTQDIEKNTVLFKENYDQRLKEPVVLPSPFPNLLVNGGSGIAVGMMS
NIPPHNLREVIAGVILQIDQPQVSVEQLMEKVSGPDFPTGGLIIGNEGIINAYKTGRGKV
TMRGKALIEQGKNGKSLIVITEIPYQVNKSTLAAKIETMADSGKIEGISEVRDESDREGI
RLVVECRKEADPLNILRLLYKHTQLEDTFGIINLVITAEGTPKVLGLKEINAAFIQHRKI
VVTKRTEFDLEKARLKAHILEGLVIAINNLDEVIATIRSSKTPSIAKASLITRFELSEIQ
AQAILDMKLQHLTNFELEGIKKEHADILKLINELESILADINKVYDIIKKELKDIADKHG
DDRRTTILPEEMRNEIDLSAFGEPECIFQVALTANGFIKRLPLQAKKKDNALVCSFKDGD
TLQEKLICSNKDRLFFFTRSGEFYSINSKTIPEGKNRDKGGPLTNLFTLPSGESIASILA
VNDVIEDHFFVFVTKSGQVMRSPVSDFINARSSEAIGLKNNDSVVKVFLSDGQGELLLAT
SRGQVIRFLVMEVNPMGRKSRGVKGMTIGNEDWIVDALMCVNEGNPLSDLLTITQRGFLK
RTALDEYKPQGRAGKGIAIGKVDSNTTGYLVGVMLVRNEDVVNVIQDSGIVTKVEMKDVK
IESRTKAGIQLIPVLLDDYTIKLI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagcataactgaagacaacattatccagcgtccgctggaggatgttttaccggagtca
tttttaggctattctaaacatgttatcttacaacgagccgttcctgatgttagggatggg
ctgaaaccagttcatcgccgaattttgttttctatggacgaaataggaatgcatactgat
aagccctatagcaagtctgctcgtttagtgggggactgcatgggtaagtatcatccccat
ggagactcctcaatttatgaatcagcagtgcgtatggcccaaccttgggctacacggtat
ccaatggtagatggacaggggaattttgggtccattgacggagacaatgcagcggcaatg
cgttacacggaaatgagaatgactcccttatcccagctgatgactcaagatatcgagaaa
aacaccgtgctatttaaagaaaactatgaccaacgactcaaagagccggttgttctgccg
agtccttttcctaaccttttagttaacgggggatcaggaattgctgttggaatgatgtct
aatatacctcctcataatttgcgcgaagtcatagctggtgtaatacttcaaatagatcag
cctcaggtttcggttgagcagcttatggaaaaggtgagcggtccagactttcccaccgga
ggactgatcattggtaacgaaggcattataaatgcttacaaaacaggacgcggtaaagta
acgatgcggggaaaagctttaatagagcaaggaaaaaacggtaaaagtctcatagtaatt
accgaaatcccctatcaagtcaataaatcaacactggctgccaagattgagacgatggct
gattcaggaaaaattgaagggattagtgaagtcagagatgagtctgatcgcgagggaatt
aggctcgttgttgaatgccggaaagaagctgatccgctgaatattttacgtcttctttat
aaacacactcaattggaagacacctttggaattattaacttagttattactgccgaaggt
actcctaaggtactagggctaaaggaaattaatgcagcttttatccagcatcgaaaaatc
gtcgtcactaaacgtacagagttcgacttagaaaaggctcgtttaaaggctcatattttg
gaaggtttagttattgccattaataatcttgatgaagtgatcgctactattcgttccagt
aaaaccccttcaattgccaaggcttccctaattacccgtttcgaattatctgagattcaa
gctcaagctattttggacatgaaactccaacatttaacgaactttgaacttgagggtatt
aaaaaagagcatgccgatattttaaagctaatcaatgagctggaaagtattttggctgat
attaataaggtatatgacattataaaaaaagagcttaaggatattgcagataagcatggg
gatgaccgtcgtactactattttacctgaggaaatgcggaatgagattgatctaagtgcc
tttggagaacctgagtgtatattccaagtcgccttgacagcaaatgggtttatcaaacgt
cttccgcttcaagcaaaaaagaaggataacgcccttgtttgttcctttaaggatggggat
accttacaggaaaagttaatctgcagcaataaggatagactgtttttctttactcgatcg
ggagagttttactcgattaactctaaaactatacctgaaggaaaaaatagagataaaggg
gggccgcttactaatctctttaccttgccttccggagaaagtatagcttctattctcgcc
gttaatgatgtgatagaagatcatttctttgtttttgttacaaagagtggacaagttatg
aggagcccggtaagcgattttattaatgctcgttcctcagaagcgataggcctgaaaaat
aatgatagtgtggttaaagttttccttagtgacgggcaaggagaattattgcttgccacc
agcaggggtcaagtgattcgattcctggttatggaagtaaaccctatgggtcgtaaatca
cgcggtgttaaaggaatgacgataggtaatgaagactggattgtcgatgccttaatgtgt
gtcaatgaaggtaatcctctttcagacttattaacaattacgcaacgagggttcttaaaa
aggactgctttggatgaatacaaacctcaaggcagagctggaaaagggattgccattgga
aaggtagattctaatactaccggttaccttgtgggggtaatgctggttaggaatgaggat
gtagtaaacgttatacaggatagcgggattgtgactaaagttgagatgaaagatgttaaa
atagaatcaaggacaaaagctggaatacaactaattcccgttttattagatgattataca
attaagttgatttag
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