Desulfosporosinus meridiei: Desmer_2221
Help
Entry
Desmer_2221 CDS
T02207
Name
(GenBank) ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dmi
Desulfosporosinus meridiei
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmi03400
]
Desmer_2221
Enzymes [BR:
dmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desmer_2221
DNA repair and recombination proteins [BR:
dmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Desmer_2221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFQ44159
UniProt:
J7IVH1
LinkDB
All DBs
Position
2340170..2344231
Genome browser
AA seq
1353 aa
AA seq
DB search
MSKPKWTQEQTAAIRLQGELLVAAAAGSGKTAVLVERLIHRILNTEDPVDVDRFLVVTFT
KAAANEMRERIGKALDDALFQEPDPREIERILKQRNLLHQASITTLHSFCLELIRKYFYQ
LELDPAFRVADQAEADLLRQDVIEDLFEARYAAQDADFLKLVEAFGTDRDDRPLMEYVLS
LYSFAYSQPQPKAWLSDLSRAYTWESIENLMQSQWGQAIRQGLSDLVSESLNLFERAEQL
CQSPGGPLPYALALQDDLNRAGLLDRALKKGEWAQVEAEYYSAINFPKLPAIRSKSKKTT
AVATEEVIVDESAQKELQEECKKLRDDAKKKLNSIKDAVFAYPLENQLPALREMGGMAGT
LGELVIEFSQSYSTAKGQRSIVDFSDLEHFALNLLEEEGEASLIAQGLKEFFAEVLVDEY
QDINPVQERILHQVSRQGESPNLFMVGDVKQSIYRFRMADPNLFIAKYNTLPHWQTDQLT
DPTNESKTMVIDLNRNFRSRVEVVKGVNYLFRQIMTLSAGEIVYDDQAALQYGASFVAGQ
NQISTAEGPIEVHLIDSKSIKGELSTYFDEGTKDVVANEDQRQAEGTESSNSTENPRDSE
ETISTEDMDKARLEARFVAMRIQGIVQGAEFKIYDKHMGDFRPVRYSDIVVLMRSYSAVA
PIYIEEFQSKSIPVYAETTSGYFGASEVETILSLLKIIDNPHLDIPLAAVLRSPLVCLNG
SELGKVRMMLPEGDFFEALTMAVWAGSGTENLKSEQEKDFRDILGLYEDSLPEKLLQARQ
ILETAPQLKDKISAFWHNLQGWRTKSRRTSLADLLWSLYEETGYLAYVGTLPAGVQRQAN
LGVLYDRARRYEATRYRGLFRFLRFLERFQGQGKDLGSARALGENEDVVRLITVHASKGL
EFPVVFVVGLGRTFNTQSLKGKMLLHSKLGVGMPIIDVENNVRYPSLIQYAVKQRLAQES
LAEELRILYVALTRAKERLFLYGCLDNWDTTLKKWFRSFDWQDIPLPTGQLRSAKCFLDW
IGPALVRHPAQLFGETSPQTTCTLPESNSQWKILLHNSVEETHEDCLDSIPTEGLEESSS
GEASEVGSVEEWYTEVSRRLSWQYPHGKSVRQVAKTSVSELKRQQTWHVDNQASAMPTLK
KQSNIVLRPKFMQVAQQLTAAERGTAMHTVMQHLPFNELAEIWATMSYRDQVNEIREFVH
KLEQTEVLNYEQRMIIQPEQIVHFLGTPLGQRLFKANQILREVPFTLTFPSESMTKVLVQ
GVIDVVLIYKDEHDNNSAEILDYKTDSFPEDEDSDPEQILRERYTLQLSLYAQAIERLVK
IEVRRCTLYSFALGREVAIRELRKSALEVVLPF
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaccaaaatggacacaagaacaaactgccgccatcaggttgcaaggggaactc
ttagtagccgctgctgcaggttcagggaaaactgctgtacttgttgaacgtctaatccat
agaattttgaatactgaagaccctgtcgatgttgatcggtttttggtcgttacatttact
aaagcagcggccaatgaaatgagggagcgtattggcaaagccttagacgatgctttattt
caggaaccagaccctagggaaattgagcgtattctcaaacaacgcaacctgcttcatcaa
gccagtattactaccttgcattctttctgtctggaattaatccgtaagtacttttaccaa
ctggaattggatcctgcttttcgagttgccgatcaagctgaggcagacctactgcgtcag
gatgttattgaggatctttttgaagcaaggtatgcagcacaggacgctgactttcttaaa
ctggttgaagcctttggcacagatcgtgatgaccgacccctaatggagtatgtactgagt
ctgtattcctttgcctatagtcagccccagcctaaggcctggttaagtgatctgtccaga
gcatacacctgggaaagtatcgaaaatttgatgcaaagccaatggggtcaagctattcgc
caaggactctctgatcttgtcagtgaaagtttaaatttgttcgaaagggcagaacagctc
tgtcaatctcccggtggcccgctgccttatgctttagctctgcaagatgatcttaaccgc
gcaggcttacttgaccgtgccttaaaaaaaggggagtgggctcaagtagaagcggagtat
tactctgcgatcaatttccccaaactgccggcgatacgctctaaatccaagaagacaacc
gccgttgccactgaggaagtaatagttgatgaatctgcgcaaaaggaattgcaggaagag
tgtaagaaattaagagatgacgctaaaaagaaacttaattcaataaaagatgcagtattc
gcttatccccttgagaatcagcttcctgccttgagagagatgggggggatggctgggacg
ctgggagaattggtcattgaattttcacagtcctattcgacggctaaaggacagcgtagc
attgtggacttttcggatctcgagcattttgcgctgaatttgctggaagaagagggagaa
gcatctttgatcgctcaaggattaaaggagttctttgctgaagtattagtggatgaatat
caggatatcaatccggttcaggaacgcattttacatcaggtatccagacaaggggagtcg
cctaatttattcatggtgggagatgtgaagcaaagcatttatcgttttcgtatggctgac
cccaacctttttattgccaaatataatacccttcctcattggcagactgaccagctaact
gacccgacaaatgagtcaaagacaatggtcattgatctaaaccgcaactttcgcagtcgg
gttgaagtcgtaaagggtgtgaattatctttttcgccagatcatgaccttgagtgccgga
gaaatagtctatgatgatcaagcagctttacaatatggtgcatcctttgttgcgggacag
aatcaaatcagtacagctgaagggcctattgaagttcatttaattgactcaaaaagcata
aaaggcgagttgtctacatactttgatgaaggaacaaaagacgttgtggcaaacgaagat
cagcgacaagctgaaggcacagaaagcagtaactctacggaaaatccaagggactcagaa
gaaactatatcgacagaggacatggataaagctcgactggaagcccgttttgtcgcaatg
agaattcaaggtattgttcaaggagcagaatttaagatttatgataagcacatgggggat
tttcgtcctgttcgttattcggatattgtggtattgatgcgatcctactcggcagttgcc
ccaatttatatcgaagaatttcaaagcaagagtattccggtctatgcggaaacaaccagc
ggctattttggcgccagtgaagtagagaccatattatccctgcttaaaatcatcgataat
cctcatttggatattcctttggcagcagtacttcgttctccgttagtctgtctcaatgga
agtgaattgggcaaagtccgaatgatgcttcccgaaggggatttctttgaagccttaacc
atggcagtatgggctgggtctggcactgaaaaccttaagtctgagcaagagaaggatttc
agagatatattgggcctctacgaggactcactgccggaaaagcttttgcaggctcgtcag
attctagaaactgctcctcagttaaaggacaaaatctcggctttttggcataatctccag
ggctggcgcacaaaatccagacgaacatcccttgccgatttgctgtggtcactttatgaa
gaaaccgggtacttagcctatgtgggcaccttaccggcaggtgtacagcgtcaggccaac
ttgggtgtgctatatgaccgagcacgtcgttatgaagcaacccgttatcgggggttattt
cgtttccttcgcttcttagagcgcttccagggacaaggtaaagacttgggaagtgcacga
gccttaggggaaaatgaagatgtggttcgcttaattacagttcatgccagtaaaggatta
gaattccccgtcgtatttgtcgttggcctgggaaggacctttaacactcaaagcctcaaa
gggaagatgcttttacattctaaattaggcgtgggaatgccgatcattgatgtggaaaac
aatgtgcgctacccgtcgttaattcaatatgctgtaaaacaacgtttagctcaagaatct
ttggccgaagagctgcgtattctttatgtagcgcttaccagggccaaggagcgtctgttt
ctttatggctgcctggataactgggatacaactcttaagaaatggtttcgtagctttgat
tggcaggatatacccttaccaacgggtcaactaagaagcgctaagtgctttctggattgg
atcggtccagccttagtgcgtcatcctgctcaacttttcggtgaaacaagtccccaaact
acttgtaccttgccggagtcaaattcacaatggaaaattcttcttcataatagtgtcgaa
gaaactcatgaggactgcctagattccattccaacagaaggattagaggaaagcagttcc
ggagaggcatctgaagttgggtctgtagaagagtggtatactgaagttagccggcgctta
agctggcagtatcctcatggaaaatctgttagacaagtggccaaaacaagcgtcagtgaa
ttaaaacgacagcagacctggcacgtggataaccaggcatctgccatgcccactcttaag
aagcaatcaaacattgtactgaggccgaaatttatgcaagttgcgcaacaattaacggct
gcagaacgagggactgcaatgcatacagtgatgcagcatctcccctttaacgaattagct
gaaatctgggcaacaatgtcttatcgggatcaagttaatgagataagagaatttgtgcat
aaacttgaacaaactgaagttttaaattatgaacagcgtatgatcattcagcccgaacag
attgttcattttttaggcactcctttagggcagagacttttcaaggcaaatcagattctc
agagaagtaccctttactctgaccttcccatcagagagcatgacaaaagttctggtccag
ggcgtcattgatgtggttcttatctacaaggatgaacatgataataattcagcagaaatt
ctcgactataagacggattcgtttcctgaagatgaagacagtgatcctgagcagattctc
agagagcgctatacccttcaactatcactctatgcccaagcaattgaacgcttagttaaa
atcgaagttcgacgctgtaccctttattcatttgctcttggccgggaggtagccatccgg
gaacttcggaagagcgctttagaggtggtattgcctttctga
DBGET
integrated database retrieval system
