Desulfosporosinus meridiei: Desmer_2860
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Entry
Desmer_2860 CDS
T02207
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi03030
DNA replication
dmi03430
Mismatch repair
dmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desmer_2860
03430 Mismatch repair
Desmer_2860
03440 Homologous recombination
Desmer_2860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmi03032
]
Desmer_2860
03400 DNA repair and recombination proteins [BR:
dmi03400
]
Desmer_2860
Enzymes [BR:
dmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desmer_2860
DNA replication proteins [BR:
dmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desmer_2860
DNA repair and recombination proteins [BR:
dmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desmer_2860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RMI2
DUF655
Motif
Other DBs
NCBI-ProteinID:
AFQ44765
UniProt:
J7ISW1
LinkDB
All DBs
Position
complement(2984145..2987657)
Genome browser
AA seq
1170 aa
AA seq
DB search
MRAQVAHNMHGFVHLHNHTEFSLLDGAARIKNLVQRAVELKMSALAITDHGVMYGVIDFY
KACKQAGIKPIIGCEVYVAPNKRTDKVQGKDDSNYHLVLLAETEQGYRNLIKLVSMAHIE
GFYYKPRVDKEILRKHARGIIALSACLAGEVSDYLVHDQLETAIKTALEYEEIFGKGNFF
LELQDHGIEEQRKVNQGMWRVHESTGIPMVATNDVHYVNREDAFVQDALLCIQTGKTLED
TARMRFSSQEFFLKSEQEMSLLFGEHPELLSNTSMIAERCQMNFQFGENYLPVFEVPPGY
TLDNYLEAECRKAFPRFYPQMTELECQRLDYELKVIFQTGFSGYFLIVADFCRFARENGV
VVGPGRGSAAASMVAYLLGITSVEPLRFDLLFERFLNPERISMPDIDIDFDPEGRERVIR
YVTEKYGSDKVCQIITFGTMGAKAAIRDGGRVLAIPLFRVDKVAKAIPSDLGMTLEKALE
VSPDLARMVDEDEEIKRLYTLAKSLEGMTRHASTHAAGVVIAKDPLTNYLPLQRTSEDFV
MTQFPMKAVEEIGLLKMDFLGLRNLTILQEAVRRIEETHGLKLDLLTLALDDSKTYELLA
SGNSTGIFQLESGGMRAILKDLKPTSFEDIIAVVALYRPGPMEQIPEFIRRKRGGNITYL
HPKLEPILKSTYGIIVYQEQVMQIARDLGGYSLGRADLLRRAMGKKKKEIMAEERQNFIY
GLQDSSGEWIIPGALRLGLTLEDAEEIFDLMAKFAEYGFNKGHATAYAVISYQTAYLKAN
YPLEFMAALLSTVMGSSDKISFYIQDARNSGIQVLPPDVQYSQVGFSLEEQAIRFGLGAI
RNVGVNVVEKILEARQEGEFKSLDDFCLRVDQKVLNRRVVESLIRSGAFGSLCTRAQALA
VIDQVLETTSRRQKDRLSGQFSLFDLDEDMEEGTALPEIPDFKEREILDMEKEFLGLYLS
GHPLSSVLPLLKDYMSSDILTCLEGEEEKKVALGGLVTGFRQNITKKGEMMGSFVLEDLT
SGIEVLVFPRVYAQTPSISNDDVVVVVGRYNIRDEEKKIFAEKITKLEDLKPSTVKAPKQ
ELAAVAQVSEKPKRLYLRFSNQNSDLMETVLSVLQRFPGSQPVYFYFEDSKKVLEGKQSF
WVDDRDELTKELCEVMDKCNVVWRQAKNFA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagggctcaagtagctcataatatgcatggctttgtacacctgcataatcatacagaa
tttagcctgctagacggggcagcacgaattaaaaatttagttcagcgtgctgtggaactg
aaaatgtcggctttggctatcacagatcatggagttatgtatggagttattgacttttat
aaggcttgtaaacaagcgggaattaaaccgattattggctgtgaggtttacgtcgcacct
aataagagaacggataaagtacagggaaaggacgactcaaattatcacttggtcttgtta
gctgaaactgagcaggggtatcgaaacttaataaaattagtttccatggcgcatattgaa
ggtttctattataagcctagggtagataaggaaattcttcgcaaacatgctcggggaata
atcgctcttagtgcttgtttagctggagaagtttccgattacttagttcatgaccaactg
gaaacggcaatcaaaaccgctcttgagtatgaggagatatttgggaaaggtaactttttt
ctggaactgcaagatcatggcattgaagagcagcgcaaggttaatcaaggaatgtggcgg
gtgcacgagagtacaggaattccaatggtggctaccaatgatgtacattatgttaatcgt
gaagatgccttcgttcaagacgctttgctctgtatacagaccggaaaaactttggaggat
acagcccggatgcgtttttccagtcaagagttttttctgaaatctgagcaggagatgtct
ctcctcttcggggaacacccggaacttttgagcaacacatccatgatcgctgaacgttgt
cagatgaattttcagtttggggaaaattatttaccggtgtttgaggttcccccagggtat
accttagacaattatctggaggcagaatgccgtaaggcctttcctcggttttatcctcaa
atgactgaattagaatgtcagaggttagattacgaactaaaggtcattttccagacgggt
ttttcaggatattttttaattgtggctgatttttgtcgatttgccagggagaacggagtg
gtggttggtccgggaagaggatcagcggcggcaagtatggtggcttatctgttaggcata
acctcagtcgagcccttgcgctttgatctccttttcgaacgtttcttgaatcccgaacgt
atttccatgccggatattgatatagattttgacccggagggtcgagagcgtgtcattcgg
tatgtcacagaaaagtatggctctgataaagtttgtcagattatcaccttcggaaccatg
ggtgcaaaggcggctatcagagatgggggacgagttttggctatccccttatttcgagtt
gataaagttgctaaagcaataccttcagatctcggaatgaccttggaaaaagctttagag
gtgtccccggatttggctcgtatggtagatgaggatgaagaaattaaaagactctatact
cttgccaaatcacttgaaggaatgactcgtcatgcttctacccatgcggcaggggtggtg
attgctaaagacccactgacaaattatctccctctccagaggacctctgaagattttgtc
atgacccagtttcccatgaaggctgtcgaggaaatcggccttctaaaaatggattttttg
ggtttgagaaatctaacgattttgcaagaggctgtccgacgtattgaagaaactcatggt
ttaaagctagatctactaaccttagccctggatgattcaaaaacctatgagctactagct
tccggaaatagcaccggaatttttcagctggagagcggcggaatgcgtgccatcctcaag
gatcttaagccaacatcctttgaggatattattgccgtcgtagctttataccgccctgga
ccaatggaacagatcccggaatttatccgcaggaaacgtggagggaacattacttatctg
catcccaaactggagccaattcttaaatcgacctatggtattatcgtttatcaagaacaa
gtcatgcagattgctcgagatctaggcgggtactctctgggaagagctgatctgctccgt
cgagcgatgggtaaaaagaagaaagaaatcatggcagaagagcggcagaactttatctac
ggcttgcaggatagcagtggagaatggattattccaggagctttgagattgggcttgacc
ctcgaagatgctgaagaaatatttgacttaatggcgaagtttgcggaatacggctttaat
aaagggcatgctacggcatacgctgttatttcctatcaaacagcttatttaaaagctaat
taccctctagaattcatggcagccctcttaagcacagtgatgggttcttcagataaaatt
tccttttatattcaagatgctcgcaatagtggaatacaggtacttcctcctgatgttcaa
tatagccaggtaggattttcgctagaagaacaagcgattcgctttggtttaggggccatt
cgcaatgtaggggtcaatgttgtagagaaaatactcgaagcaaggcaagagggggagttc
aaatctctggatgatttttgcctgcgtgttgaccaaaaggttctaaaccggcgtgttgtg
gagagtttaattcgttcaggtgccttcggatcactttgtacaagagcccaggctctggca
gttatagatcaggtattagagacaacttcccgtcgacagaaagatcggctttcagggcaa
ttttctctttttgatttagatgaagacatggaggaaggtactgctttacctgagattcca
gacttcaaggaacgggagattttagacatggagaaggagtttctgggcctttatttaagt
ggacatcccctgtcgtctgtcttaccgttgctgaaagattatatgtcttccgatattttg
acttgtctggagggggaggaagagaagaaggtggccctgggaggattagtaaccggattt
cgtcagaatattacgaaaaagggggagatgatgggtagtttcgtattggaagatttgacg
agtgggattgaggttttagtgtttcctagggtgtatgcccagactccctctattagtaat
gatgatgtagttgttgtagtaggacggtacaacatcagggatgaagagaaaaagattttc
gctgagaaaattaccaaattagaagacttgaaaccgagcacagttaaggctcctaagcaa
gaattagcggcagtagctcaagtctcagaaaaacctaaacgtctttatctgaggttttca
aatcaaaacagtgacttaatggaaacagtgttgagtgttttacaacgttttccagggagt
caacccgtctacttctattttgaggatagcaaaaaagtacttgaagggaaacagagtttc
tgggttgacgatagggatgagttaacaaaagaactttgtgaagtgatggacaaatgcaat
gtggtttggagacaagctaaaaattttgcttaa
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