Desulfosporosinus meridiei: Desmer_2904
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Entry
Desmer_2904 CDS
T02207
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dmi
Desulfosporosinus meridiei
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmi03016
]
Desmer_2904
Enzymes [BR:
dmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Desmer_2904
Transfer RNA biogenesis [BR:
dmi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Desmer_2904
Prokaryotic type
Desmer_2904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_6
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
AFQ44795
UniProt:
J7ISZ4
LinkDB
All DBs
Position
3019388..3020299
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AA seq
303 aa
AA seq
DB search
MLDVCLLGTGGMMPLPNRWLSSLLLRSMGRMLLIDCGEGTQIPLRKIKWGFKGIDVILFT
HYHADHISGLPGILLSIGNSGRKEPLTLMGPPGIQKVVDCLTVISPGLPYDLSLIELSDT
NRTTTIMSNIEIKSIPVEHTLPCLAFSIEFKRQGKFDVERASNLKIPLNYWNSLQKGQTI
TWDGKIIKPEMVVGEIRKGIKVSYCTDTRPTNSLVQFISESDLLVCEGMYGKQSDLRKAE
QKKHMLFSEAGLIAKLGRVKELWLTHYSPSLTSPEEYIDLVKSVFPNTILGQDLLTKTIN
YFE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgtttgtctattgggtaccggagggatgatgcctctgccgaacagatggctg
tcatccctgctcttaagatccatggggagaatgcttctaatagattgtggagaaggaact
caaatccctcttaggaaaatcaaatggggttttaaaggcattgacgttattttatttacg
cactatcatgctgatcacatttccgggttgccagggattcttctctcaatcggcaattcg
ggaaggaaagaaccattaacactaatgggacctcctggtatacagaaagtagttgactgc
ctaacagtaatttcacctggattgccctatgatttgtcattaattgagctatcagatact
aacagaacgacgacaataatgagtaacattgaaattaagagcatacctgttgagcatact
cttccttgcttagcattcagtattgagtttaaaagacaaggtaaatttgatgttgaacgt
gctagtaacttgaaaatccctttaaactattggaatagtcttcaaaagggccagacaatt
acatgggacggtaaaatcataaaaccagagatggttgtgggcgaaataagaaaagggatt
aaagtttcttattgcactgatacacggccaacgaatagcttagtccaatttataagcgag
tcggatttattagtttgtgaaggtatgtacggtaaacagtccgacttaagaaaagctgag
caaaaaaagcatatgctgttttctgaagccggattaattgcaaaactaggaagggttaaa
gaactttggttaactcactatagtccatccttgacaagtcctgaagagtatatagatctt
gtaaaatcggttttcccgaatacaattctaggtcaggatttgcttactaagacaataaat
tactttgagtga
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