Desulfosporosinus meridiei: Desmer_3075
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Entry
Desmer_3075 CDS
T02207
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desmer_3075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmi02000
]
Desmer_3075
Transporters [BR:
dmi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Desmer_3075
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFQ44957
UniProt:
J7ISW0
LinkDB
All DBs
Position
complement(3211546..3213153)
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AA seq
535 aa
AA seq
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MRKNLRVLVALLTCVLLFVVGCGGSKDAATKPEGSDGTKQLIMALDPDYETFDPGLAYEV
YALLVLHPVYDTLMQFEDNLDAPIDGIAESHEVSKDGLTYTFKLHKGVKFASGNPLSAQD
VKWSVERSINLKGNGAFLTDGIKSIETPDQNTVVFNLKEQDASFLTKLTYNAFGVIDSKL
AMENGATNAADASTSDKAKLWFDTHSAGSGPYVIESYTPKVEVVLARNKNYWGEAPYYDK
VVLKAISDPGTQLMMLEKGDIDIAFNLGPEHVKQIQNKPGIEIKKAQSMTLTFLLMNRDP
KVGGPIANPDVQKAIRLALDYRGMQTIAGEGSITPVAPFQVGFLGTLPPRDPKTAQDIEK
AKELMKKAGYEKGFKTTLEVATLAVEGMDLPTLAQKIQNDLLQIGIETEIKTSDIMVALD
PYRKGTQALSLWYWGPDYPDPNTQLAFLPGNPVGLRANWTAEMNPKLVELGKKAAVEVDK
AARIKNLEDIQKMMDEDSAFDVLLQHARHYATRDNIKGTDYIDLYKINLKNVSAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaagaaccttagagttttggtcgctctactgacctgtgtattactctttgttgta
ggatgtggcggcagtaaggatgctgcaactaagcctgaaggctcggatggtaccaaacag
ttgattatggccctggatcctgattatgaaacctttgatccgggtctggcctacgaggta
tacgctttactagtcctgcatcccgtttatgataccttgatgcagtttgaggataatctg
gatgcccctattgatggtattgcggaaagccatgaggtcagcaaggatggtctaacctat
acctttaagcttcataagggagtaaagtttgccagcggcaatcctctttctgctcaagat
gttaagtggagcgtggagagatcgattaacctaaagggaaatggggccttcttaacagat
ggaattaaatccatcgagactccggatcagaatactgttgtttttaacctgaaggagcaa
gacgcatccttcttaactaaattgacctataatgcctttggtgttattgacagcaaattg
gctatggagaatggggcaactaatgccgcagacgccagtacctctgataaggccaaactg
tggtttgatacccactctgccggatcaggtccttacgtgattgaatcttacactcctaaa
gtggaagtggtcttagctcggaataagaattattggggagaagctccctattacgataag
gttgttttaaaagcaatttctgatcccggaacccaattaatgatgctggaaaaaggagat
atcgatattgcctttaatttaggacctgaacatgttaagcaaattcaaaacaaaccgggg
attgaaattaagaaagcccaatcaatgaccctaacctttttattgatgaacagggatcct
aaagttggcggcccgattgctaacccggatgtgcaaaaggcaattcgcttagccttagac
tatcgaggaatgcagacaatagccggtgaaggttcgataacacctgtagcgcccttccaa
gtcggatttttaggaactctgcctccacgagatcccaaaactgctcaagatatcgagaag
gcgaaagagttaatgaaaaaagccggttatgaaaaaggctttaagactaccttggaagta
gctactttggcagttgagggtatggatttaccgaccttggctcaaaagatccagaacgat
ttgctgcaaataggtattgaaacagaaatcaaaacctctgatattatggtagccctggac
ccctatcgtaaaggcactcaggccttgtccctttggtattggggccctgactatccggat
ccaaacactcaattagcgtttttacccgggaaccccgtaggtctgcgtgctaattggaca
gctgaaatgaatcctaaattagtagaattgggtaagaaagcagcggtagaggtagacaaa
gctgcccgcatcaagaaccttgaagatattcaaaaaatgatggatgaagatagtgccttt
gatgtcttactccagcatgctcgtcattacgcaactcgtgataacatcaaaggtacagac
tatattgatctctacaaaataaatttaaaaaatgtttcagcaaaataa
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