Desulfosporosinus meridiei: Desmer_3221
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Entry
Desmer_3221 CDS
T02207
Name
(GenBank) MutS domain V
KO
K07456
DNA mismatch repair protein MutS2
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Desmer_3221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmi03400
]
Desmer_3221
DNA repair and recombination proteins [BR:
dmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Desmer_3221
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
AFQ45101
UniProt:
J7J295
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Position
complement(3370560..3372518)
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AA seq
652 aa
AA seq
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MNANNTLEFNIILETLAEHALSQKAREKLLSLKPFLNERECKAKMQETTEARKILEGIGT
PPLASMKELDKILDLTEKGSMLAPEQLTGICGFISSCKRTKKYLNKAEAFNTGIAFYGHS
LSPLDMLFGEIERCIRNEGVDDGASSVLRDIRRKIENTKSAVKIKLEDILRSKKEWFTDG
YVTIRNGRFVLPVKKGYKNQLSGTVIDTSSTGSTCFIEPAAVRKLQEELSLLQIDEDNEI
RKILYTLTVLVEEHINELRINKDCMETLDFIFAKAKLSIEMKAVPVSITTERKIIIKQGR
HPLLKPDLCIPLDFEILGGLGDDAINGVVITGPNTGGKTVALKTIGLLSIMAQSGLHVPV
SPGSVFSMHNSVFCDIGDGQSISENLSTFSSHIQNIVAILQEVSRESLVLLDELGSGTDP
AEGMGLAIAILAELNQRGCLFVATTHYPEIKDFAKNTKGLMNARMEFDRENLQPLYRLQI
GEAGESCALYIAKRLGFPGHMLKRAQMEAYGGRSSKLRDRPTIMFDEDNTNDEDNTKKSD
NVSHNKIQKEIPKEKTPSRSESFNIGDCVRVYPQKSLGIVYRRTNEKGELGVQIKDKKQL
INHKRLKLFLPASELYPEDYDFSIIFDTVAIRKARHQLAKGHDVIIEYEEHD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaacaatacattggaatttaatataatacttgaaactttggctgagcatgca
ctttcccaaaaggcaagggaaaaattgctctccctaaagccatttttaaatgagcgagag
tgcaaagccaaaatgcaggaaacaacagaagcacgcaaaattttagagggtataggcacg
ccacccctggcctcaatgaaagagttggataaaattctggatttaacagagaaaggctca
atgctggcccctgaacagctcacaggtatttgtggttttatttcttcctgcaaaagaacg
aagaaatatcttaacaaggctgaagcctttaatacgggtatagctttttatggtcattct
ttaagtccactggatatgctttttggggaaattgagcgctgtatcagaaatgaaggggtt
gacgatggtgcttcttcagtccttcgtgacattcgcagaaaaatagaaaacacaaaatct
gccgttaaaataaagctagaggacattctgcgcagcaaaaaggaatggttcacagatgga
tatgtcaccatccgtaatggacggtttgtcttgccggttaaaaaaggctataaaaatcag
ttgagcggaacagtcattgatacttcaagcactggcagcacctgttttattgagccagca
gcagtcagaaagctgcaggaggaattgtcccttttacaaattgatgaagataatgagatt
agaaaaatattatacacccttaccgtacttgttgaagagcatattaatgagttgagaatc
aacaaggactgcatggaaaccttggactttatatttgccaaggcaaagctgtccatcgag
atgaaagcagttcctgtgtccattacaacagaacgaaaaatcatcataaagcagggaaga
caccctttattgaagccagacctctgtattcctcttgattttgagattctagggggcctg
ggtgatgatgctattaacggggttgtaattaccgggccgaatacagggggaaaaaccgtt
gccttaaaaaccattggcttactgtcaattatggctcaaagtggacttcacgttcctgtg
tccccaggcagtgtattttctatgcataacagtgttttctgcgatatcggtgatgggcaa
agcatttctgagaatctatctactttttcctcccatatccaaaatattgtagctattctc
caggaggtatcaagggaaagtctggttttgcttgatgagttaggctccggtacagaccct
gctgagggaatgggactagcaattgcaattttagcggaattaaatcagcgaggctgtctt
tttgtggccaccacccattacccggaaatcaaggattttgccaagaacacaaaaggactt
atgaatgcccgtatggagtttgatcgggaaaacttacagcccctatacagactacaaatt
ggcgaggccggggaaagctgtgccttatacattgccaaaagattaggctttcccgggcat
atgctgaagcgagcacaaatggaagcctatggcggcagatcctctaagttaagagacaga
ccaactattatgtttgatgaggataacactaatgatgaggacaacaccaaaaaatcagac
aatgtttcccacaacaaaattcaaaaagaaattccaaaggaaaaaacaccctcacggagc
gaaagctttaatataggtgactgtgtaagagtttacccccaaaaatctctggggattgtt
tacaggagaaccaatgaaaaaggcgagcttggcgtgcagattaaagataagaagcagctg
attaatcacaagcggttaaagcttttccttcccgccagcgaactctatccggaggattat
gatttttcgattattttcgatacggtggcaatccgcaaggccagacaccagttagcaaaa
gggcacgatgtaataatagaatatgaggagcatgattaa
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