Desulfosporosinus meridiei: Desmer_3361
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Entry
Desmer_3361 CDS
T02207
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi00260
Glycine, serine and threonine metabolism
dmi00630
Glyoxylate and dicarboxylate metabolism
dmi00670
One carbon pool by folate
dmi00680
Methane metabolism
dmi01100
Metabolic pathways
dmi01110
Biosynthesis of secondary metabolites
dmi01120
Microbial metabolism in diverse environments
dmi01200
Carbon metabolism
dmi01230
Biosynthesis of amino acids
dmi01240
Biosynthesis of cofactors
dmi04981
Folate transport and metabolism
Module
dmi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Desmer_3361
09102 Energy metabolism
00680 Methane metabolism
Desmer_3361
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Desmer_3361
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Desmer_3361
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Desmer_3361
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Desmer_3361
Enzymes [BR:
dmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Desmer_3361
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AFQ45227
UniProt:
J7ITN3
LinkDB
All DBs
Position
complement(3503595..3504824)
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AA seq
409 aa
AA seq
DB search
MFSNITEIDELVNRHVLYRQNCLNLIASENCSSLAVRNHLTSDFGNRYGCYSTADPANRE
YRGNKYIHEFEMKTQDLVKDVFGAAYADLRPIGGHIAGVASVLGLLSPHDLVLEIHLRDW
GHGLVTLMREASHLQESIRLEFIPFDEDRAVDLPGLLRMIHDLKPKMIIFGGSGMLWPEP
IAEIKEIASREGIILVHDSSHVNGLIAGGVFPNPLQQGVDVMIGSTHKSFPGPQGGFILT
NDGEIYKKIGNTLGASLVTSHHLQRLPALAVAMLEMKAFGKEYGTQVIKNSQALGRYMEE
DGFRVIGSARGYSQTHLILVDVSDFGSGLEISKQLEKANILCSDDFGQLDRELRIGTAEV
TRNGMREGDMKFIADCFRRIIIEKEEPGQVAEDIRGFTEHYRDCLYALK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaacatcacagaaattgatgaattagtgaatcgccatgtcttataccggcag
aactgcttaaacttaattgcttcagaaaactgttccagtctcgctgtacgcaatcattta
acctctgatttcggaaatcgttatggctgttattccacggctgatcccgccaatcgggaa
taccggggcaacaaatatattcatgaatttgaaatgaaaacccaggatttagtcaaggat
gtttttggcgccgcctatgcggacctgaggcccataggcggacatattgccggggtagca
tccgtactgggtctgctttccccccatgacctggttttggagatacatctcagggactgg
ggacatggattggtgaccctgatgcgggaggcctcccatttacaggaaagcatccgcctg
gaatttataccttttgatgaagaccgagctgtggatctgcctggattgctccggatgatt
catgacttaaaacccaaaatgatcatttttgggggatcagggatgctttggccggaaccc
attgctgagataaaagaaattgcctctcgggaagggatcatcctggttcacgattcttcc
catgttaacggtctcattgccggaggggtatttcctaatcccctgcagcagggagttgac
gttatgatcggcagcactcataagtcctttcccggacctcagggaggctttatcctcacg
aatgacggggaaatctataaaaaaatcggcaataccttaggggcttccttggttaccagc
catcatttgcagcggcttcccgctttggcggtagccatgctggaaatgaaggcctttgga
aaggagtacggaactcaagttatcaagaattcccaagccttaggcaggtatatggaggaa
gatggtttccgggtgattggttccgccaggggctattcccaaactcatttaattcttgtc
gatgtcagtgacttcggcagcggtctggaaatctccaagcaattggagaaggctaacatc
ttgtgctccgatgattttggccagcttgaccgggaactgcgcattgggactgctgaggta
accaggaatggcatgagggaaggtgacatgaaatttattgccgactgcttccggagaatc
attattgaaaaagaagaaccaggacaagtggctgaagacatcaggggttttacagagcat
tatcgtgattgcctgtatgcattgaagtaa
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