Desulfosporosinus meridiei: Desmer_3477
Help
Entry
Desmer_3477 CDS
T02207
Name
(GenBank) transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dmi
Desulfosporosinus meridiei
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmi03000
]
Desmer_3477
Transcription factors [BR:
dmi03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desmer_3477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
HTH_8
AAA
AAA_2
AAA_16
DUF7629
IF2_N
AAA_7
AAA_22
ATPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AFQ45324
UniProt:
J7IYY4
LinkDB
All DBs
Position
3608117..3609760
Genome browser
AA seq
547 aa
AA seq
DB search
MTQNKFNLDFESFQLLLLEMAQQRSVDELLKLVTSSLASTYNVALARVWMITPGDICNTC
NEYAACQDKSRCLHLMASHGLSIDNKTTWNTIQHGAFRRFPMGVRKVGRIASSGQPGNIS
AISGNSDWIADRGWVKKEHIASFVGQPLIYKGEVLGVLAMFTRIALDQGALGLMRMIADH
LAYAVSNARAFEEIKRLKRQIENENAYLRKEVNIAQSFNGIIGKSNALHEILQQILLVAP
IDTSVLITGESGTGKELIAREIHSRSKRAGHPMIKINCAAIPKNLFESEFFGHARGAFTG
AYKDREGFFQIADRGTLFLDEVGEIPLELQGKLLRVLQEGEYQRVGEEKVRKVDVRIISA
TNRDLGREVTAGRFREDLYYRVNVFPFLLPPLRDRKEDIPLLVNHFLALTSRRLNRPKPH
LTQSEIESLTKYDWPGNIRELQNVMERAVITSHLGKLDSGISSIAHLTVSTTARGVQTTG
QIDKGGILTDAELRQLERENMIEALRVCNGKIYGPRSASEKLGIKPTTLISRLKKMGITL
EDWNGSN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaataaattcaatttagatttcgaaagctttcagctcttgcttctagagatg
gcccagcagcgttcggtcgatgaattgctaaaattggttacatcatctctcgcatcgacc
tataacgtggccctggctagggtctggatgatcaccccaggggatatttgcaacacttgt
aatgagtacgcagcctgccaggacaaaagccgctgcctccacctgatggctagccacggg
ctgtccatagacaacaaaaccacctggaacacaatccaacatggtgcctttcgacgcttc
cccatgggagtacgcaaggtaggccggattgcctcatcaggccagcccggcaacatctca
gccataagcggcaactctgactggattgccgatagaggctgggtaaaaaaagaacatatc
gccagcttcgtcggccagccgttgatctataaaggtgaagtccttggtgtgctggcaatg
tttacgcgcatcgctttagatcagggagctctcgggctgatgcgtatgatagctgatcat
ttagcttatgccgtttccaatgcgcgagcctttgaagagatcaaacgtctcaaaaggcaa
atcgagaatgaaaacgcttacctgcgcaaagaagttaatatcgcccagtccttcaacggt
atcatcggtaaaagcaacgccctccatgaaattctacagcagatccttcttgttgctccc
atcgacaccagtgtgcttataaccggggaatccggcacgggcaaggagctcattgcccgg
gagatccactcaagaagcaaacgggccgggcatcctatgatcaaaataaattgtgccgca
atccccaagaatcttttcgagagcgaattcttcgggcatgctcggggtgctttcactgga
gcatacaaggatcgagagggattttttcagattgccgatcggggaacactattcctggac
gaggtcggcgagatccccctcgaactgcagggtaagcttctgcgtgtcctgcaagaaggt
gaataccagcgcgtcggcgaggaaaaagtccgaaaagtagatgtacgcatcatttccgcc
acaaaccgcgatctcgggcgagaggtcacagcgggacgctttcgtgaagatctttactac
cgagttaatgtcttcccctttcttttgcctccccttcgtgaccgcaaggaagacataccg
cttttggtcaaccactttttggctcttacctctcgaagactcaaccgcccaaagcctcac
ctcacccaatctgagattgagtccttgacaaaatacgactggcccggcaatatccgtgaa
ctacaaaacgtcatggagcgggcggtcattacttctcatttagggaagctggactccggt
atttcttccatagctcatttgacagtcagcaccactgcccgcggagtccaaaccacgggg
cagatcgacaagggcggcatcctaactgacgccgaactacgtcaattggagagagaaaat
atgatcgaggcgcttagagtctgtaacggcaagatctacggaccgagaagtgcaagcgag
aaacttgggataaagccgaccactctgatttcgcgcttaaaaaagatggggatcactctt
gaggattggaacggtagcaattag
DBGET
integrated database retrieval system
