Desulfosporosinus meridiei: Desmer_3532
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Entry
Desmer_3532 CDS
T02207
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi03420
Nucleotide excision repair
dmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desmer_3532
03430 Mismatch repair
Desmer_3532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmi03400
]
Desmer_3532
Enzymes [BR:
dmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desmer_3532
DNA repair and recombination proteins [BR:
dmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desmer_3532
MMR (mismatch excision repair)
Other MMR factors
Desmer_3532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFQ45375
UniProt:
J7IUH8
LinkDB
All DBs
Position
complement(3666345..3668486)
Genome browser
AA seq
713 aa
AA seq
DB search
MISEKDFFEEIKARGFDLTEQQKRAVVHNQGPLLLLAVPGAGKTTVLTVRLAYLILVKNI
DPRRILCLTFGRAAAKEMRERFVENFGAMVRGQTEGCGEIQFSTIHSFAYEIVRTAFRQR
GTRFEIIEEQTGAQSKTGVLRRIYEKHNASSITDEQLEGLQNTICYVKNTLSKPAELLNC
DIKNFSLIYNDYEDYKESSRPRLIDYDDMLSLAYQELEGNPTCLEYYRKRFDYMLTDESQ
DTSLLQHKIIEMVVKPKNNIFVVGDDDQSIFGFRAAEPKYLLEFEQTYPGAKILRMEQNF
RSTPQIVTVACGFIRSNQLRFDKAMFTKNPRGGVLQSKQFEGIQEQNQFIIRKLQSQKDL
AQVGILYRNNLSAISLADELDRAKIPFYMRESGKQRFFSHWAINDMLNFLRFSFNDKSLP
VLERIWSKLSCPIRKQHLDLLKQMPIDRSIFEILAEQPGVTTKVKTEFLDLKKWFKELNT
LSPAKAIPYIRNQLDYDKALKRMCESLGFSEDYVVSLLDVLSSIAQKEPTIVEFANRLTH
LDKLMMSSYKNKHKNVVTLSTIHSAKGLEWDQVYLIDLVEGIIPEWETIREDQGGKKELL
EEERRLFYVGMTRAKRELTLCSLNYYHQKRVKASRFLGEVSLVLQGKKPQEVTSQVSTPL
SDLVPGLVVQHKSFGEGVILKDEGNMIVVRFKDSSQRSFMKDICAKQRLIWAV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgattagcgaaaaggatttctttgaagaaatcaaagccagaggttttgatttaacagaa
cagcaaaaacgggctgtggttcataaccagggccctcttttacttttagcggttcccggc
gccgggaagaccacggttctcacggttcgtttagcctatttgattcttgtgaaaaacata
gatcctcgaaggatcctttgtctaaccttcggacgagctgccgctaaggaaatgcgagaa
cggtttgttgagaattttggggcaatggtaagggggcaaactgaaggctgtggagaaatt
caattttctaccattcacagcttcgcttatgagatagttcgaaccgcttttcgacaaaga
ggtaccagatttgaaattattgaggaacaaaccggggctcaaagcaagacgggagttctg
cgaagaatctacgaaaagcataatgcttcctcaattactgatgagcagctggaagggttg
cagaataccatttgttatgtgaaaaatactttgagcaaacccgcagagcttttaaactgc
gacattaaaaatttctccctcatatataacgattatgaggactataaggaaagcagccgc
ccacgtctgattgattatgacgatatgctttctcttgcttatcaagagttagagggtaac
ccaacctgcttggagtattatcgaaagcgctttgactatatgcttacggatgagagccaa
gatacgtctcttcttcagcacaaaatcatcgaaatggtcgttaagcctaagaacaatatt
tttgtcgtgggggatgatgatcaatcaattttcgggtttcgagcagcagagccaaagtac
ctattagagtttgaacagacttaccctggggccaagattctgcgcatggagcagaacttt
cgttcgactccccagattgtcacagtagcctgcggttttattcgttccaatcagctgcgc
tttgataaagccatgtttactaagaatccaagggggggcgtccttcagagcaaacaattt
gaaggtattcaagaacaaaatcaatttattattcggaaactccagagtcaaaaggattta
gcccaggtagggattctgtatcgcaataatttatccgccatttctttggcagatgagctg
gatcgggctaaaattcccttttatatgcgtgagtcaggtaaacagaggtttttctcccac
tgggccattaacgatatgttaaatttccttcgcttctcatttaacgataaaagcctgccc
gtcttggagcggatatggtctaagctaagttgtccaatccgcaagcaacatcttgattta
ctaaagcaaatgccaatcgatcgttcaatttttgaaattctggctgaacaaccgggagtg
actactaaggtaaaaacagagtttttagacctaaaaaaatggtttaaggagcttaatact
ctttcacctgcgaaggcaatcccttatatccgaaaccagcttgattatgataaagcgctg
aagcgaatgtgcgagtccctaggcttttctgaagactatgtagtaagcctcttggatgtt
ctaagttcaatagcgcagaaggaacctacgattgtagagtttgccaatcgattaacccat
ctggacaagctaatgatgtcttcctataaaaataaacacaagaatgtcgtaaccctttca
accatccattcggccaagggtttagaatgggatcaggtctacttaattgatcttgtcgag
gggatcattcctgaatgggagactattagggaagatcaaggtggcaagaaggaattgtta
gaggaagaaagacgacttttttatgtaggcatgactagggccaaacgagagttaacctta
tgttctctgaattactatcatcagaaaagggttaaagcctctcgcttccttggcgaggtc
agtcttgtgctgcaaggtaaaaagcctcaagaggtgacttctcaagtatcgaccccgctg
agtgacttagtccccgggttggttgtacagcataaatcatttggagaaggagttattctt
aaggatgaaggaaatatgattgtcgttcgttttaaggatagttcacagcgttccttcatg
aaagatatctgtgccaagcagaggttgatttgggctgtttga
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