Desulfosporosinus meridiei: Desmer_3704
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Entry
Desmer_3704 CDS
T02207
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desmer_3704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmi03400
]
Desmer_3704
Enzymes [BR:
dmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Desmer_3704
DNA repair and recombination proteins [BR:
dmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Desmer_3704
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AFQ45540
UniProt:
J7IUY0
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All DBs
Position
complement(3858084..3858911)
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AA seq
275 aa
AA seq
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MPLLFGTAGVPLSSKDRSSEGGVRRIRELNLDALELEFVQGVRMGEEKARKVGMIAQENN
IALSCHAPYYINLNSREPEKISASRDRILQTGRIAKILGVRSVVFHPAFNHDNSSEIVLA
RVVRELSLVRETLDAEGNEVILRPETTGKGTQFGDLQESILIAQEVPGVLPCIDFGHLHA
RTNGRYNSYDEFCEILDVTAESLGDRWVKNVHFHISGIEYGLKGEKRHLPLRESDCRYEE
LIKACHSFGVDGLAICESPNLEEDALLLQKVYTAQ
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgccattattatttggaacagcaggtgtcccgctctcttcgaaagatcgttccagtgaa
ggaggggtgcgtcgcatacgagagttaaatctcgacgccttagagttagagtttgtccag
ggagtacgaatgggggaagagaaagcaagaaaagttggtatgattgcccaagaaaacaat
attgctttaagttgtcatgctccttactatattaatctaaactctcgcgaacctgagaaa
atttcggcaagccgagatcgtattttacaaactggacgaattgcaaaaattttaggtgtg
cgtagtgtagtatttcatcctgctttcaatcacgataattcatctgagatagtcttagcg
cgagtagttcgtgaactatctctcgtgcgagaaacccttgatgcagagggtaatgaggtc
atccttcgtccagaaactacaggaaaagggacgcaatttggggatctgcaagaaagtatt
ttgatagctcaagaagtacctggagttttaccttgtattgactttggacatcttcatgcc
cggacaaatggccggtacaattcctacgacgaattttgtgagatcttggatgtaaccgcc
gagagtttaggggatcggtgggtgaagaatgttcattttcacatttccgggattgaatat
ggattaaagggtgaaaaacgccatcttcccctaagggaatctgattgccggtatgaggaa
cttatcaaagcctgtcatagctttggtgtggatgggttggcaatctgcgaaagccccaat
ttggaggaggatgcactcttattacaaaaggtatacacggcacaatag
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