KEGG   Desulfosporosinus meridiei: Desmer_3734
Entry
Desmer_3734       CDS       T02207                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
dmi  Desulfosporosinus meridiei
Pathway
dmi02024  Quorum sensing
dmi03060  Protein export
dmi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dmi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Desmer_3734
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Desmer_3734
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Desmer_3734
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dmi02044]
    Desmer_3734
Enzymes [BR:dmi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Desmer_3734
Secretion system [BR:dmi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Desmer_3734
  Eukaryotic Sec-SRP protein
   Desmer_3734
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA APS_kinase AAA_33 AAA_30 AAA_31 AAA_17 nSTAND3 FliD_C AAA_16 ParA CLP1_P NPHP3_N ArsA_ATPase Thymidylate_kin MMR_HSR1 NTPase_1 AAA_14 AAA_18 AAA AAA_24 Fer4_NifH 6PF2K MobB KTI12 NB-ARC ATP_bind_1 cobW NACHT TsaE ABC_tran AAA_19 ResIII
Other DBs
NCBI-ProteinID: AFQ45570
UniProt: J7IV11
LinkDB
Position
complement(3886110..3887468)
AA seq 452 aa
MFQGLSEKLQETFKRLKGKGKLKEADVNEAMREVRVALLEADVNFKVVKDFVAKVKERSI
GQEVLESLSPAQHVIKVVHEEMIDLMGGASGKILIASKPPTVIMLVGLQGAGKTTHAAKL
ANMLKKQGKHPLLVACDIYRPAAIKQLQVLGAQLNVPVFSMGEENPRDIAKASITHANQN
GQDVVIIDTAGRLHINEELMGELRDIKGSVKPHEILLVVDAMTGQDAVNVAESFHGDLGL
DGVILTKLDGDTRGGAALSIKAVTGCTIKFIGLGEKMDALEAFHPDRMASRILGMGDVLT
LIEKAQESFDEKKAKEMEQKLRKQEFTLDDFLDQMQQMKKMGPLSSILEMIPGVGKQLKD
VNIDEKDTAHIEAIIRSMTTEERRKPAIIKDSRKKRIAKGSGTSVQDVGRLLKQFEQMQK
MMKQFSGGGMGMLGGGKKGKKGKKPKFPFPTV
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtttcaaggactaagcgaaaaactccaagaaacatttaagaggcttaaaggaaagggc
aagttaaaggaagcagatgtcaacgaggctatgcgtgaagttcgcgttgccttattggag
gcggatgttaactttaaagttgttaaggactttgttgccaaagtaaaggaacgatcaatt
ggtcaagaagtcctagaatctctttcaccggcacaacatgttattaaagttgttcatgaa
gaaatgatcgaccttatgggaggggcatccggtaaaatcttgattgcctcaaagcctcct
acagtgattatgttggttggtcttcaaggagcgggaaaaaccactcacgctgctaagttg
gccaacatgcttaagaaacaagggaaacatcctctgcttgttgcatgtgatatctaccgt
ccagccgcgatcaaacagttgcaggttctaggagctcaactgaatgtgccggttttttct
atgggagaggaaaatccgagagatattgctaaagcaagtattacccatgccaatcagaat
ggacaagatgtggtcataattgatacagccggacgtttgcacattaacgaggaattgatg
ggcgagctgcgggatattaaagggtctgtcaaacctcacgaaatcttgctggttgtagat
gctatgacaggacaagatgcggttaatgtcgcggagtccttccacggagacttagggctt
gatggtgtaattctcacaaagttagatggagatactcgtgggggcgcagctctttcgatc
aaagcagtgactgggtgtaccattaaatttattggcctcggggaaaagatggatgccctt
gaagctttccatcctgatcgtatggcttctagaattctgggaatgggcgatgttcttact
ttaattgagaaggctcaggaatcttttgatgagaaaaaggccaaagaaatggaacaaaag
ctgcgcaaacaggaatttacccttgacgattttcttgatcagatgcagcagatgaaaaaa
atgggccctctttcctcaatcttagaaatgattcccggagtagggaaacagttaaaagat
gttaatatagatgaaaaagacactgcacatattgaagctattatccggtcgatgacgaca
gaagaacgtcggaagccagccattataaaagattcacgtaaaaaaagaatcgctaaagga
agcggaacttcagttcaagacgtaggacgtctcttaaagcagtttgaacaaatgcaaaag
atgatgaagcaattctcaggtggcggcatgggtatgcttgggggcggaaaaaagggcaag
aagggtaagaaaccgaaatttccgtttccgacggtataa

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