Desulfosporosinus meridiei: Desmer_3957
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Entry
Desmer_3957 CDS
T02207
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Desmer_3957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmi03021
]
Desmer_3957
Transcription machinery [BR:
dmi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Desmer_3957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
HHH_RecD2
Motif
Other DBs
NCBI-ProteinID:
AFQ45789
UniProt:
J7J0B7
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All DBs
Position
complement(4112953..4114143)
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AA seq
396 aa
AA seq
DB search
MANSKVIGTKKNDPREGGGQMNEKQKIDNVQALIQSGKKKGSLTYKEIMDALQGIELSAD
QIDDIYQQLGRMGIDVVPEPEEVELEILKGVKVDEDDDIVEDPDDDVEEEAEVDLSVPEG
VGIDDPVRMYLKEIGRVPLLSADEEIELAKRMENGDEEAKRRLAEANLRLVVSIAKRYVG
RGMLFLDLIQEGNLGLIKAVEKFDYVKGFKFSTYATWWIRQAITRAIADQARTIRIPVHM
VETINKLIRVSRQLLQELGREPAPEEIAKVMDIPVERVREIMKIAQEPVSLETPIGEEED
SHLGDFIPDDDAPAPAEAASFILLKEQLEEVLETLTPREEKVLRLRFGLDDGRTRTLEEV
GQEFGVTRERIRQIEAKALRKLRHPSRSKKLKDYLE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaatagtaaggttataggcaccaaaaagaatgatccgagggaaggtgggggacag
atgaacgaaaagcaaaagattgacaatgtccaagccctcattcaaagtggaaaaaagaag
ggatctttaacttacaaagaaattatggatgctcttcaaggaattgaactttccgcggat
caaattgatgatatctatcagcaactaggacgcatgggaatagatgtggtgccggagcct
gaggaagttgaactggaaatcttaaaaggcgttaaagttgacgaagatgatgacattgta
gaggatccggacgatgatgttgaggaagaagcggaagtggatctttctgtaccggagggt
gtaggaattgatgatcctgttcgcatgtacctaaaagaaatcggacgagttcccctgctc
tcagccgatgaggaaatcgaattggccaaacgaatggaaaacggtgacgaagaagcaaaa
cgccgcttagctgaggcaaacttgcgccttgtggttagtatcgctaagcgctacgtcgga
cggggcatgctttttttggacttaatccaggaaggtaatcttggtctgattaaagctgta
gaaaaatttgattatgttaaaggctttaagtttagtacctatgccacttggtggattcgt
caagctattacccgtgccattgctgatcaagctcgaaccattagaattccggtgcatatg
gttgaaactatcaataagctaattcgggtttctcgtcaacttttacaggaattaggaaga
gagccagctcccgaagaaattgcaaaagtaatggatattcctgtggagagggttcgggag
attatgaagatcgctcaagaacctgtgtcccttgaaacccccattggggaagaggaagat
tctcatctaggtgatttcattccggatgatgatgctccggcacccgctgaggctgcttcg
ttcatcttgttaaaagaacagttagaagaagtcttagagaccttgacccctcgcgaagaa
aaagttcttagattacgctttggacttgatgacggacgcaccaggactttagaggaagtt
ggacaggaattcggtgtcactcgtgaacgtatccgacagatcgaggccaaggcattgcgt
aaattacgccaccctagccgcagtaagaaattgaaggattatttggagtaa
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