Desulfosporosinus meridiei: Desmer_3986
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Entry
Desmer_3986 CDS
T02207
Name
(GenBank) DNA replication and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desmer_3986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmi03400
]
Desmer_3986
DNA repair and recombination proteins [BR:
dmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Desmer_3986
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Desmer_3986
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AFQ45817
UniProt:
J7IVJ6
LinkDB
All DBs
Position
complement(4144509..4145282)
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AA seq
257 aa
AA seq
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MAVYHADALVVRSRQFGESDRVLTLFSRELGKLQAVAKGVRKPKSRQRAGAQLFTYGDFL
IHRGKTLDTVSQCSPKESFPHLWNDLDRSFAATGIAELLDISTIKEQPNIELFRLTLTCF
FLLEHFQPSLVLGAYALRLMDVLGYRPFLEGCAECGVGVKGDRLFFSLEAGLLCGNCRER
YSGRWIRAGSVAFMRQLIRADITKLDRMRWGVWMEQEILETLRLYIEHKFERPLKSWRMG
SLMQDNLEQSFDGKEGK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtttatcatgcggacgcgttggtggtccgcagtagacaatttggtgagtcggat
cgtgtactcactcttttttcccgtgagttggggaaacttcaggcggttgccaaaggagtg
cggaaacctaagagtcgtcaacgagcaggggctcagctattcacctatggagattttctg
atccatcgagggaagacactagacactgtttcccagtgcagccctaaggagagttttcct
catctttggaacgatctggatcggtcatttgctgcgactggaattgctgagcttttagac
atttcgacgattaaagagcagcctaatattgagctatttagacttaccctaacttgtttt
tttctgctcgaacattttcaaccctcacttgtgcttggtgcatatgctttacggttaatg
gatgtcttgggctatcgtccttttttagaaggatgtgctgagtgcggggttggtgtgaag
ggggatcgcttgttttttagtttagaggcggggctcttgtgtgggaactgtcgagaaaga
tattctgggcgctggattcgcgcgggtagtgtggcgtttatgcggcaattgattcgtgct
gatattactaagcttgatcggatgcgctggggagtttggatggagcaagagattttagag
acattacggctttatattgaacataaatttgaacgtcctcttaaatcttggagaatggga
agtttgatgcaggataacttggagcaaagttttgatggaaaggaagggaaataa
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