Desulfosporosinus meridiei: Desmer_4056
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Entry
Desmer_4056 CDS
T02207
Name
(GenBank) PAS domain S-box
KO
K06714
arginine utilization regulatory protein
Organism
dmi
Desulfosporosinus meridiei
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmi03000
]
Desmer_4056
Transcription factors [BR:
dmi03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desmer_4056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
PAS_4
PAS
PAS_9
PAS_8
AAA
AAA_22
Mg_chelatase
HTH_30
MCM
nSTAND6
AAA_5
AAA_16
AAA_2
Bac_DnaA
bpMoxR
PAS_7
AAA_3
CLN5
PAS_10
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AFQ45887
UniProt:
J7IVP3
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All DBs
Position
complement(4223154..4224566)
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AA seq
470 aa
AA seq
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MPGVVMDQVFRQLFNSIDEGVIVTDPDGQIIFYNSEMAKLEELLSEQVVGRYLNEVYDAV
TVESSEHLSVVLTKEPVLEKHKTYFTNKGKEVTIVASTFPVLEDDQVIAVYSVCKDISKF
KELLTKTMQLHDQIGFEGQEPRGNNGTRYTFDSIVYASSAMKDLVASAKKAALADGFILV
FGETGTGKELLVQAIHNHSPRKHEPFVAINCAAIPETLLESILFGTTKGAFTGAVESKGL
FQQAGNGTLFLDELNCMSINLQAKILRVVQERMVRRVGGTMEIPVRCRVISSTNVDPWES
VNNGSLRKDLFYRLAVMTLFIPPLKDRKEDVEALIHSFLNRYQKIYGFGQVQIDAVLKDI
FLRYQWPGNVRELEHIIESAMNMLDGRKVITVDHLPHYLRAKFVSQDGTFPEYYKKGSNT
LAHVLREVEKQVIRDALKSHDGNITRAAESIGIARQNLQYRIRKLDVQNF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtgttgttatggatcaagtttttaggcagctttttaattcaattgacgaaggg
gttattgttaccgaccctgatggccagataatcttctacaattctgaaatggcaaagtta
gaagagttgttgtccgaacaagttgtcggaaggtatttgaatgaagtctatgatgctgtt
accgtggaaagcagtgaacacctaagtgtggttttaactaaggagccggttcttgagaag
cataagacttattttacgaataaggggaaagaggtcactattgtggccagtacctttcct
gtgctggaagatgatcaggtaattgcagtctattccgtgtgtaaggatatcagtaaattt
aaagaactcttaactaagacaatgcaattgcatgaccagattggatttgaaggtcaagaa
ccccggggtaataatggaactcgctacacctttgattccattgtttacgccagttctgcc
atgaaggatctggttgcctctgctaaaaaggctgccttggcggatggatttattttagtg
tttggtgagacgggaactggcaaagagctgttggttcaagcgattcacaatcacagccct
cgcaagcatgagccttttgtagcaattaattgtgcggcaattccggaaacccttttagag
agtatactttttggcacaaccaaaggggcttttaccggtgccgtagaatcaaaaggattg
tttcagcaagcgggaaatggcactttgtttctggatgagctgaattgcatgagtattaat
ttacaagccaagattcttcgggttgtgcaggaaagaatggtcagacgagtcggtgggact
atggaaattccggttcgctgtcgggtgattagttctacgaatgtggatccctgggaatca
gtgaacaatggcagtttgcgtaaagatcttttctatcgtttagccgtgatgactctcttt
atcccgcccttaaaagatagaaaagaagacgtagaggccctgattcattccttcctcaat
cgttatcaaaagatctacggctttggtcaagttcaaattgatgccgtcttaaaggatatt
tttcttcgctaccagtggcccgggaatgttcgggaattagaacatattattgaaagcgcc
atgaatatgttagatggccgaaaggttattaccgtcgatcacttgccccactatctgaga
gcaaaatttgtcagtcaggatggaaccttccctgaatactacaaaaaaggatctaatact
ttggctcatgtactgagagaagtagaaaagcaagtgattcgagatgccttgaaaagccat
gacggaaatattaccagggctgcggagtctataggaattgcccgtcaaaatcttcaatac
cggattagaaaacttgatgtgcaaaatttttag
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