Desulfosporosinus meridiei: Desmer_4113
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Entry
Desmer_4113 CDS
T02207
Name
(GenBank) acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi00061
Fatty acid biosynthesis
dmi00071
Fatty acid degradation
dmi01100
Metabolic pathways
dmi01212
Fatty acid metabolism
dmi02024
Quorum sensing
dmi04146
Peroxisome
Module
dmi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Desmer_4113
00071 Fatty acid degradation
Desmer_4113
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Desmer_4113
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desmer_4113
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmi01004
]
Desmer_4113
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmi04147
]
Desmer_4113
Enzymes [BR:
dmi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Desmer_4113
Lipid biosynthesis proteins [BR:
dmi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Desmer_4113
Exosome [BR:
dmi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Desmer_4113
Exosomal proteins of breast cancer cells
Desmer_4113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
SMK1_alpha_su
Motif
Other DBs
NCBI-ProteinID:
AFQ45942
UniProt:
J7IVT2
LinkDB
All DBs
Position
complement(4286930..4288330)
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AA seq
466 aa
AA seq
DB search
MYLGIDRQSRELIAAIDDTGRSLSYGELCDFTIAFGAMLPRRSIVFCLCKNTIGGLAGYI
GCLANQVVPLLLGAAIDFKLLAHLLGEYTPAYLWMPESLVSKFNLSILYKSYGFVLVPMK
HDIYPINDDLAMLLTTSGSTGSPKLVRHKTSNLEANAKNVAAFFGWTKDDRAIVDLPMQY
TMGLNVINSHLYVGASVLLTEHNLMSPDFWRNIKDQRATNFTGVPFSYEVLFKLRFTRMD
LPYLTTFAEGGGKLTAAMFAEIADYASRTGKRFFATYGTTETSARLAFLPAELAKAKIGS
IGRGIPGGELFLLDEKGQEIKEKEAEGELGYRGQNVTMGYAFDREDLLLGDEWLGEFHTG
DIARRDRDGCYYIIGRKSRFLKLYGLRVSLDRCERLIKDEFQIDCVCTGTDRRMDIYITE
EQYKDEVQRFISKKTGIIRSAFAVDVLDRIPRNETGKVQYKAIYRA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaggtattgatagacaaagccgggaattaattgccgccattgatgatacgggc
aggtcattaagctatggcgaattgtgtgactttaccatagccttcggagccatgctgcca
cggcggtccatcgttttttgtctgtgtaagaataccattggcgggctggctggctacata
ggctgtttggctaatcaggttgttcctcttttgctgggtgcagctatagacttcaagtta
ctggcccatttgctgggggaatacacaccggcttacctatggatgcccgagagccttgta
tctaaatttaacttatccatcctatataaaagttatggatttgttcttgttcctatgaaa
catgacatatatcccattaatgacgacttagccatgctgctcacaacctccggctcaacc
ggcagcccgaaattggtgcgtcataaaaccagtaatcttgaagcaaacgccaaaaatgtt
gccgcttttttcggctggacaaaggacgatcgtgccattgtggatttgcccatgcagtat
accatggggcttaatgtcattaacagtcatctctacgtaggtgcatccgtgctgctgacg
gagcataatcttatgagtcctgatttctggcgtaatattaaggatcagcgtgccactaat
tttacaggagttcctttcagttatgaggttttatttaagctacgtttcacgcgcatggat
ttgccatacttaaccaccttcgccgaaggaggaggaaagctgacggctgccatgtttgcc
gagatagcggactatgccagccgtaccgggaaaagatttttcgctacttatggcacaacc
gagacatcagcccgtctggcctttttacctgcggagctggctaaagctaagatcggaagc
attggccgagggatacccgggggtgagttgtttttgctggatgaaaagggtcaggaaata
aaggaaaaggaagccgagggcgagttgggctatagagggcagaatgtgaccatggggtat
gcttttgaccgggaagatttgctgttgggtgatgaatggctgggagaatttcatacgggg
gacattgcccgaagagatagggacggatgctattacatcatcggcaggaaaagcaggttt
ttgaagctttatgggctgcgggtcagtctggaccggtgtgaaaggttaattaaggatgag
ttccagatcgattgtgtctgtacaggcacagatcgacgcatggatatctatatcacagag
gagcaatacaaagatgaagtacaaagatttatcagtaaaaaaaccgggataatcaggtct
gcttttgctgtggatgttttggatagaataccccgcaatgagaccggtaaggttcagtat
aaggctatttatcgagcttga
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