Desulfosporosinus meridiei: Desmer_4373
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Entry
Desmer_4373 CDS
T02207
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desmer_4373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmi03400
]
Desmer_4373
Enzymes [BR:
dmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Desmer_4373
DNA repair and recombination proteins [BR:
dmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Desmer_4373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
NPC1_MLD
T2SSM_b
Motif
Other DBs
NCBI-ProteinID:
AFQ46185
UniProt:
J7IWS7
LinkDB
All DBs
Position
complement(4588305..4589060)
Genome browser
AA seq
251 aa
AA seq
DB search
MKLISWNVNGIRACVKNGFLDFFQKENADIFCLQETKVQADQIPFNLEGYYQYWNFAQKK
GYSGTAIFTKKEPMKICYGIGQEEHDKEGRVITLEFEKHYVVTVYTPNSQRGLARLEYRM
KWEEEFLKFIKDLEKNKPVIFCGDLNVAHEEIDLKNPSSNRKNAGFSMEERNKFGEIIKS
GFIDTFRYFYPDKTNAYTWWSYMFNARVNNAGWRIDYFCVSEILKDRLKAAVIYNDVMGS
DHCPVGLEMEE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatctcatggaatgttaatggaattagggcttgtgtaaaaaatggttttttg
gactttttccagaaggaaaatgcggatattttttgtcttcaggaaacgaaagttcaggca
gatcaaatcccctttaatttggagggctattatcagtattggaattttgctcaaaaaaag
ggctactcaggaacggccattttcactaagaaggagccgatgaagatttgctatggaata
ggccaggaagagcatgataaagaaggaagagttataactctggaatttgaaaaacactat
gtagtaacggtatatactccaaattctcaaagagggttagcacgactggaatacagaatg
aaatgggaagaagaatttttaaagttcattaaagatctcgaaaaaaacaaacccgtcatc
ttctgtggagacttgaatgttgcccatgaggaaattgatcttaaaaatccgagttctaac
agaaagaatgcgggattttcaatggaagaaagaaataaattcggagaaatcattaagagt
ggctttatagatacatttaggtatttttatccggataagacaaatgcctatacttggtgg
tcttatatgttcaatgcaagagtcaataatgccggatggcgcattgattacttttgtgta
tcagaaatcttaaaagatcgattgaaagctgcagttatttataatgatgtcatgggttca
gatcattgccctgttggcttggaaatggaagaataa
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