Desulfosporosinus meridiei: Desmer_4402
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Entry
Desmer_4402 CDS
T02207
Name
(GenBank) acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi00061
Fatty acid biosynthesis
dmi00071
Fatty acid degradation
dmi01100
Metabolic pathways
dmi01212
Fatty acid metabolism
dmi02024
Quorum sensing
dmi04146
Peroxisome
Module
dmi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Desmer_4402
00071 Fatty acid degradation
Desmer_4402
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Desmer_4402
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desmer_4402
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmi01004
]
Desmer_4402
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmi04147
]
Desmer_4402
Enzymes [BR:
dmi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Desmer_4402
Lipid biosynthesis proteins [BR:
dmi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Desmer_4402
Exosome [BR:
dmi04147
]
Exosomal proteins
Exosomal proteins of breast milk
Desmer_4402
Exosomal proteins of breast cancer cells
Desmer_4402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AFQ46211
UniProt:
J7J5J3
LinkDB
All DBs
Position
complement(4619761..4621260)
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AA seq
499 aa
AA seq
DB search
MGNVKSVDRILSKTAQILPDKTVMYYENESISYSQLDKEVNNLAQGLMDFGLKPNEKVAL
VLGNCPNFVRMYFAILRAAGTVVPLNPLYKADEIHYILNDAKVKLLIIDQELLPMIREVR
AEKSDLNIIAIGGRKEEGIVSFEELLKKEAEPVDRNVEESDLAVCLYTSGTSGRPKGALL
SHGNLIFITYALITRMDIREDDHNLCVIPLSHAFSQFTNMLMPIFIGGSFTILPRFIPNA
VLSEIASKKISYFCAVPAMYSALLAALSQEHNYDMSSLRICLSGGAPLSVEIIKEFTKRY
GIPLVEGSGPSEAVACIGSYQAIKPGSVGPALDGVNVKVVNDHDQELPQGEIGEFCVQGP
NVMQGYLNLPEATAEALRGGWFHTGDLAKIDEEGYVYIVGRKKDMILVGGMNVYPGEVEQ
CLFNHPQVLEAAVIGSPDKERGEVPKAFIVLKRQESAEPKEFILYCRRHLANYKCPRQVV
ILASLPKNPTGKIDKKQLA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgttaagtctgttgatagaatcttaagtaaaactgctcaaatacttccagat
aaaacagttatgtattatgaaaatgagagtatttcgtacagtcaattagataaggaagta
aataacctagctcaagggctcatggactttgggttgaaaccaaatgaaaaagttgctctg
gtcctgggcaattgtcctaattttgtacggatgtattttgccattcttcgagcagctggt
actgtagtgccactaaaccctttatataaagctgatgaaatacattacatcttaaatgat
gccaaagtcaaattgctaataatagatcaggaattgctacctatgattagagaagtaaga
gctgagaaatctgatttaaacataatcgcaatcggtgggagaaaagaagagggaattgtt
tcttttgaagagctcctaaaaaaagaagccgagccagttgataggaatgttgaagaaagc
gatttagcagtttgtctttatacctcgggtacaagtggcagaccaaaaggtgccctttta
tcgcatggtaatctgatatttattacctatgccttaataacaaggatggatattagagaa
gacgatcataatttgtgtgtcattcctctttctcatgcattttcacaatttacgaatatg
ttaatgccaattttcataggcggatcttttacaatcttacctcggttcataccaaatgca
gtcttaagtgaaatagcttcaaagaaaataagctatttctgtgcagttccggctatgtat
tcggctttattagcagctctttcccaagaacacaattatgatatgtcctccttgagaatt
tgcctgagcggaggagcgcctctctccgtagagataataaaggaattcacaaaaagatat
ggtattccccttgttgaagggagtggcccttctgaggccgttgcatgtattgggtcatat
caggccattaaacctggttctgtaggaccggccttagatggcgttaatgtgaaagttgtc
aatgatcatgatcaagaacttcctcaaggagaaattggagagttttgtgttcaaggacct
aatgtaatgcaaggttatttaaacctgcccgaggcaactgctgaagcattaaggggaggg
tggttccacaccggagatttagctaaaattgatgaggaaggttatgtatatattgtagga
agaaagaaagacatgatactcgttggaggcatgaatgtttatcccggtgaagtagagcaa
tgtctttttaatcatcctcaagtcttggaagcagcagtgatcggaagccctgacaaagag
aggggtgaagtaccgaaagcttttatagtattaaaacggcaggagtctgcagaacctaaa
gaattcatactatactgtcgcaggcacttagcaaattataaatgtcctaggcaagtcgtc
attttagctagtttacctaaaaaccccaccggaaaaattgataaaaaacagttagcttaa
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