Desulfosporosinus meridiei: Desmer_4408
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Entry
Desmer_4408 CDS
T02207
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desmer_4408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmi02000
]
Desmer_4408
Transporters [BR:
dmi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Desmer_4408
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFQ46217
UniProt:
J7IWK7
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All DBs
Position
complement(4625856..4627424)
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AA seq
522 aa
AA seq
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MRKVKKIMALALSATLILVSLTGCGGSKAGSEGSTAPKASDTLIYAQGAEPRGLDPALVD
DGESAKVMSNIYEGLLKYNQDSTKVEPSLAKSWEVSPDGLTYTFHLQEGVKFHDGTDFNA
EAVKFNIDRQLPPQVTEDMPYAPFVYGSVKNVEVVDANTVKINLTSPSTPLLNNLAMIMG
APVISPKALKENNNNVNQVPVGTGPYKFVKWEKDQNIVLVRNEEYWGTKAITKNVIFKFI
KDNSARVVALNNGEADIIDGIDSTVVKQITDAGNKIFQAPGMNINYMAYNASKKPFDNSK
VRAAISQAINVPELVKSLYQGYSEPANSILPTFVEGYDKSIAQVSYDPTAAAKTLKEAGV
TSVHMITYTNPRPYNSATGQSLAEAIQGYLSKVGVTVTIDSFDWTTYKQKVKAGDFDLAF
YGWIGDNGDPDNFLNLLSVEDPTMNIARYKNEQFNGLIAKGLTIPAGADRNAVYTQLEKI
AATDAAWLPISHAQTLCAYRPNVENFYFHMTGITPFAGVAKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagttaagaaaatcatggcccttgctctatctgcaacccttatcctagtttcc
ttgacgggttgtggaggcagcaaagcaggctcagagggcagcaccgcaccaaaagctagc
gataccctaatttatgctcagggtgctgagcctagaggactggatcctgcacttgttgac
gatggtgaatcggcaaaggtgatgagcaacatttatgaaggtctcttaaagtacaaccag
gattcaaccaaagtagaaccatccttagcgaaaagctgggaagttagtcccgacggtctt
acctataccttccaccttcaagaaggggtcaaatttcatgatggcaccgactttaatgct
gaagctgtaaagtttaacattgaccgtcagttgcctccacaagtgaccgaagatatgcct
tatgcacctttcgtttacggttctgtaaagaacgtcgaggttgttgacgctaatacagtt
aaaattaatttaacatctcccagcacaccgctgctcaataatttagcaatgattatgggt
gcacctgtcatcagcccaaaagccttaaaagaaaataataataatgttaaccaagtacct
gtaggtaccggtccgtacaaatttgtcaaatgggaaaaagatcaaaacatagtcttagtg
cgcaatgaagaatactggggtaccaaggcaattactaaaaatgtcatcttcaaattcatt
aaagacaactcagctcgtgttgttgccttaaacaacggtgaagctgatatcattgatggt
atcgattctacagttgttaaacagatcacagacgctggcaacaagatcttccaggctcct
ggaatgaatattaactatatggcttataatgcttctaagaagccgttcgataattcaaaa
gttcgcgcagccatttctcaggctatcaacgttccggaacttgttaagagcttgtatcaa
ggttattccgaaccagctaattctattctgccaacctttgtagaaggttatgacaagagt
atcgctcaagtatcttatgatccaacagctgcggctaagaccttgaaagaggccggagtg
acttcagtacacatgatcacttataccaacccaagaccttataattcagctaccggacaa
tctttagctgaagcaattcaaggctacctttctaaagtcggtgttacagttacaattgat
tctttcgactggaccacctacaagcaaaaagttaaagccggagattttgacttagctttc
tacggctggattggggataatggagatccagataatttcttaaatctcttatcagttgaa
gacccaactatgaacattgcccgctataaaaatgagcaattcaacggcttaattgccaaa
ggtctaaccattcctgcaggagcagatcgaaacgcagtttacactcaactggaaaaaata
gctgctacagatgctgcttggctcccaatttctcatgctcaaacactttgtgcctacaga
cctaatgtcgagaatttctatttccatatgactggcatcactccgtttgccggggtagcg
aagaaataa
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