Desulfosporosinus meridiei: Desmer_4568
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Entry
Desmer_4568 CDS
T02207
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi00260
Glycine, serine and threonine metabolism
dmi00630
Glyoxylate and dicarboxylate metabolism
dmi00670
One carbon pool by folate
dmi00680
Methane metabolism
dmi01100
Metabolic pathways
dmi01110
Biosynthesis of secondary metabolites
dmi01120
Microbial metabolism in diverse environments
dmi01200
Carbon metabolism
dmi01230
Biosynthesis of amino acids
dmi01240
Biosynthesis of cofactors
dmi04981
Folate transport and metabolism
Module
dmi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Desmer_4568
09102 Energy metabolism
00680 Methane metabolism
Desmer_4568
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Desmer_4568
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Desmer_4568
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Desmer_4568
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Desmer_4568
Enzymes [BR:
dmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Desmer_4568
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Met_gamma_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AFQ46372
UniProt:
J7IX34
LinkDB
All DBs
Position
complement(4779048..4780304)
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AA seq
418 aa
AA seq
DB search
MDYINQWVKNNDPEVAKAIEQEEKRQSNSIELIASENFVSRAVMAAQGSALTNKYAEGYP
GKRYYGGCEYVDVVEDLARERVKKIFGAEHANVQPHSGSQANMAVYFAFLKPGDTILGMN
LSHGGHLTHGSPVNISGVYFNVVPYGVDEKTETIDYDQIRQLAKEHHPKMIVAGASAYPR
VIDFIKMREIADEAGALLMVDMAHFAGLVAAGLHPSPVPYADFVTSTTHKTLRGPRGGLI
LCKAEYAQAIDKAIFPGIQGGPLMHVIAAKAVAFGEALQPEFKTYQKNIVDNAKALAQGL
MERGFRLVSGGTDNHVMLVDVRTKNLTGKEAESILHEVGITVNKNTIPFDTASPFVTSGI
RLGTPAVTTRGMNTEAMKRIAEAIDLALTSHHEPDKLSQAREIVNSLCAEFPLYTNLD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggactatattaaccaatgggtgaaaaataatgaccccgaagttgcaaaagccattgaa
caagaagagaaacgtcaaagcaacagtattgaacttattgcctctgaaaactttgtcagt
cgagcagtgatggccgcccaagggtcagctttgactaacaagtatgccgaagggtatccc
ggaaaacggtattatggcggatgtgagtatgtagatgttgtggaagatcttgctcgcgag
cgagttaagaagatttttggggcagagcatgctaacgtgcagccacattccggctctcag
gccaatatggccgtgtattttgcctttctcaagccaggggatacaatactgggaatgaat
ttatcccatggaggtcacttgactcatgggagtccggtaaacatctcgggagtgtatttt
aatgtagttccttatggtgtcgatgaaaagactgaaaccattgattatgatcaaatacgt
cagctggccaaagaacatcatcctaaaatgattgttgccggagcaagtgcctatccgcga
gttatagattttataaaaatgcgtgaaattgccgatgaagcaggtgctttactgatggtt
gatatggcacatttcgccgggttagtggcggcagggctacacccatcgccagtcccttat
gctgactttgttacttccacaactcataagactttaaggggccccaggggcggcttaatt
ctctgtaaggctgaatatgcccaagctattgataaagcgattttcccaggaattcaaggc
gggccattaatgcatgtcattgcagctaaagcggttgcttttggggaagcccttcagccc
gaatttaaaacgtatcagaagaatatcgttgataatgccaaggctctggctcaaggtcta
atggagcgtggattccgccttgtttcaggtggaacggacaaccatgtaatgcttgttgat
gtaagaactaagaatctaacaggtaaggaagcggaaagtatcttacatgaagtggggatt
acggtcaataaaaatacaattccttttgatacggcaagtccttttgtaactagcgggatt
cgtcttggcacccctgcagttactacacggggcatgaataccgaggctatgaaacgtata
gctgaggcgattgatcttgccttgacctcacatcatgaacctgataaactgtcacaggcg
cgggaaattgtgaattcattgtgcgccgaatttcccttatatactaatttagattag
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