Daphnia magna (water flea): 116915333
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Entry
116915333 CDS
T07514
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116915333
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116915333
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
116915333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
ASCC3_N
AAA_22
AAA_19
Helicase_PWI
CHASE3
Motif
Other DBs
NCBI-GeneID:
116915333
NCBI-ProteinID:
XP_032776304
LinkDB
All DBs
AA seq
2188 aa
AA seq
DB search
MKPNPRLSRALRAFTNLSSPICGKLTDTSSHYLSELRIKQQEQDNKITWTKLASELEKSG
KSSTEIRGLLSPLRQVAQKIMGDDCGTKVIEDCAISLLLFFFEMENVTPKSLSSFGFGVI
DLSLGKETLKIVRNLISKLPETVLKYLKSENSEEPVTEFGKDVKVYPIDELSENGVDMLM
DWGNTASNFDGLTKKDISFKWEDSKTNDSRIFERKVHGRGWLEQQLALSGGNSLNIPITD
LVDSIMSVICSNKSDDELQTEFFDLLGFDRFELIQDLLENRKEMKKAEKSIATQVAIASS
KVKPYSAGPVISGQVLVQSAQEKDLMKQIRREEKRFQKLRQGYENDVEEAASMKMFQEQQ
LVVASTLPIMKHSASRTVKYPNVYDSIAEAKQSSAFVGGKKMALPESATRTNTSRYEEIN
IPLTEPAPTEVGNQLIPIASLDDISRKAFANCKNLNKIQTVVFETAYRTNENMLICAPTG
AGKTNIAMLTILQQVKQYITNGVLERKDQFKIVYVAPMKALAAEMAENFGKRLAPLGLVV
RELTGDMQLTKSEIMATQMLITTPEKWDVITRKSTGDIALTQLVKLLIIDEVHLLHGDRG
PVVEALVARTLRQVESSQMMIRILGLSATLPNYVDVAQFLHVNPYKGLFYFDSRFRPVPL
SQTFIGVKEVNPMRQMQQMDFVCYDKVVAMVQQGHQVMVFVHARNATLKTAQTLRMQAQE
KNQLHLFQPENNSGFNTAMKNAGKSRNRHLVDLLKDGFAIHHAGMLRSDRNLVEKMFSDG
MARVLVCTATLAWGVNLPAHAVIIKGTEIYDAKHGSFVDIGILDVLQIFGRAGRPQFDKS
GHGTIITSHDKLAHYLSLLTCQYPIESSFEKSMTDNLNAEITLGTVANVDEAVQWLSYTY
LFIRMRKNPIAYGINLEQIFDDPQLGGKRRELIVLAARALDKARMIRFEEKTGMLHATDL
GRTASHFYIKYDTVEIFNELMHPAMNDAEIFGLISMATEFDQLKVRDDELDELDDYLHTY
CELPVSGGSENIHGKVNILMQTYISRGPVNSFSLISDQSFIVQNASRIARALFEIVLRKN
WPLMSGRVLRVSNMIEQRVWDSQHPLRQFATLGQDILIKLEEKKLSLERLREMDSKEIGF
MIQNQRSGPIVKRNASEFPYLEVDATVQPITRTVLRIRLCIRPDFRWNDRIHGLSSEPFW
MWVEDPENNTTYHYESISLSKKQVTRREEQVIVFTIPIFEPLPSQYYIRIVSDRWLRCET
TFPISFQQLILPERHPPHTGLLDLKPLPVTALKNPEWQSLYSFPYFNPIQTQLFHVLYHT
DHNVLLGAPTGSGKTIVAEIAMFRVFREYPKSKVVYIAPMKALVRERMEDWRERLGRRLG
KNVVELTGDVTPDVRAISRADVIVTTPEKWDGVSRSWQTRDYVRAVALIIIDEIHLLGED
RGPVLEVIVSRTNFIASHTGRSLRLIGLSTAVANARDLADWLNIGQVGLFNFRPSVRPVP
LEVHISGFPGKHYCPRMATMNKPTFQAIKQHSPDKPVLVFVSSRRQTRLTALDLIGYLAA
EDSPRQFVRMPERDMEQLTISIKDPNLKLTLSFGVGIHHAGLTEKDRRLVEELFVNQKIQ
VLIATATLAWGVNFPAHLVVIKGTEYYDGKSRRYVDMPITDVLQMMGRAGRPQYDDHGVA
CVFVHDIKKDFYKKFLYEPFPVESSLLDVLPEHLNAEIVAGTICSKQDSIDYLTWTYFFR
RLLQNPAYYGLEQLEPTDVNRYLTSLIQRSLSVLEAASCTEIEEDGRVAPTSLGRIASYY
YLSYHTLQLFRDRLNQDTTLEDLLSILSDAHEYSELPVRHNEDLLNTELAKKCVLPVNPY
TYDSPHTKAHLLFQAHFSRLSLPCADYATDTKSVLDQAIRILQAMMDVSAEGGWLATTLR
IQQLLQMVIQALWIDDPAVLMLPHFNTFILPVLRTRQEQLMHLPVLQKAFAVDFAKLSNL
LSMDLSPDQIQEVRQVISNLPVIDISMSVLWGTTSTPLSIIPNCGLHDAKWIDVPADQEC
LLDITFARQSLLEATPVVTGGARPKKSASVQSVAADNGTNQTGRSRSVYAPKFPKSKDEG
WFLTLGSVEKQELLALKRVTLPRIKCSHQLSFTTPKKLGRLMLTFYFMSDSYVGLDQQYT
VYLNVCKAKRTEFDDYEADNDIYGNKIE
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaatcctcggctatcaagggctctaagagctttcacaaatctcagttcccct
atttgtggaaaattgactgacacgtcatcccattatttaagtgagcttaggataaaacag
caagagcaagacaacaagatcacatggacaaagttagctagtgaattggaaaaatcaggg
aaaagttcaacagaaattagaggattgttaagtcctcttcgacaggtggcccaaaaaata
atgggtgatgattgtggaacaaaggtgatagaggactgtgcaatcagcctcctattattc
ttcttcgagatggagaatgtcaccccaaaaagtttgtcctcttttggttttggagtaatt
gacctttcacttgggaaggagacactgaaaattgttagaaacttaataagcaagttaccg
gaaactgtgctgaaatacctgaagagtgaaaactctgaagaacctgtaacagagtttggt
aaagatgtaaaagtttatccaatcgacgagctctccgaaaatggtgtagacatgcttatg
gactggggaaatactgctagcaattttgatggacttacaaaaaaagatattagcttcaaa
tgggaagattcgaaaacaaacgacagcaggatatttgagcgaaaagtacatggtcgtggt
tggcttgaacaacagctagctctttctggtggcaattctctcaatattccaatcaccgat
ctcgtggattctattatgagcgttatatgttctaataagtcggacgacgaattacaaacg
gagttctttgatttactgggattcgatcgatttgagctaatacaagacctcctagaaaac
agaaaggaaatgaaaaaggcagaaaagtcaattgccactcaagttgccatagcttcgtcg
aaagtaaaaccttattctgcgggtcccgtcatcagtgggcaagtgcttgttcaatcggcg
caggaaaaagatttgatgaaacagatacgaagagaagaaaagcgatttcagaagctacgt
caaggatatgaaaatgacgtcgaagaggctgcctccatgaagatgttccaagaacaacag
ctggtggtagcttccacacttcccataatgaaacattccgctagtagaacagtcaaatat
cctaacgtttatgattcaatagccgaggcaaagcaatcttctgcttttgttggtggcaag
aaaatggccttaccagaatctgcgacacgcactaacacttcgagatatgaagaaatcaat
attcctcttacagaaccagctccaactgaagttggaaaccaattgattcctatcgcttca
ttagatgacattagccgaaaggcattcgccaattgtaaaaatcttaacaagatccaaaca
gtggtatttgaaaccgcttaccgaactaacgaaaatatgttaatttgcgccccaaccgga
gctggtaaaactaatattgctatgttaaccatcttgcaacaagtcaagcagtacatcact
aacggagtccttgaaagaaaagatcagtttaagatagtttatgtggcgccaatgaaagct
cttgcagctgagatggcagagaatttcggaaaacgtttggccccattaggtctagtggtt
cgtgaattgacgggtgacatgcagttgacaaagtccgaaatcatggcaacgcagatgctc
atcactacgcccgagaagtgggacgtgattactaggaaaagcacgggagatattgcgttg
acgcagttagtaaagttactaattattgacgaagttcacctcctccacggtgatcgtggc
ccagtagtcgaagctcttgtggcacggacactgcgccaagtggaatcttcgcagatgatg
attcgaatcttagggctttcagctactctgcccaactacgttgacgtggcacaatttcta
catgtcaatccgtacaagggccttttttacttcgattcccgttttcgacccgtgccttta
tcccaaacattcatcggcgtcaaagaggttaatccgatgagacagatgcaacagatggat
ttcgtttgttacgataaagtcgttgccatggtgcaacaggggcaccaagtgatggtgttt
gttcatgcccgtaacgccacgctcaaaactgcccagactttaaggatgcaagcgcaggag
aaaaaccaattacacttgtttcaaccggagaacaatagtggtttcaatacagccatgaag
aatgccggaaaatcaaggaataggcatctggtcgacttattgaaagatggattcgctata
catcacgctggaatgttacgaagtgaccgaaaccttgtcgaaaaaatgttcagcgatgga
atggcacgagttttagtatgcacagctactttggcgtggggtgtaaatttacccgctcac
gcagtcatcatcaaaggcactgagatctacgacgccaaacatggatcgtttgtcgatatt
ggcatcttagatgttctacagatttttggccgtgccgggcgtccccaatttgacaaatct
gggcacggaacaatcattacttcgcacgacaagctagcccactacctttcgttgctaacg
tgccagtatcctatcgaaagcagtttcgaaaaatccatgaccgacaaccttaacgccgag
attacgcttggaacagttgccaatgtcgacgaagccgtccagtggctaagttacacctat
ctcttcattcggatgagaaaaaaccccatcgcttacggaatcaaccttgaacaaatcttt
gacgatccgcaattgggaggaaaacgccgagaattaattgtcctagctgcccgtgcattg
gacaaagcccgaatgatccgtttcgaggaaaagacgggtatgttgcacgctaccgacttg
ggtcgaacagccagccatttttacatcaagtatgataccgtcgaaatatttaacgagcta
atgcatcctgctatgaatgacgccgaaatcttcggactgatctctatggcgacagaattt
gatcagctcaaagtgcgcgatgacgaactagatgaacttgatgattatctgcatacgtac
tgtgaattgcctgtcagtggcggcagtgaaaatattcacggtaaagtgaacattttgatg
caaacttacatctcgcgtggccccgtcaactcatttagtttaatatccgatcaatcgttt
attgttcaaaatgcgtctcgtatcgctcgcgcgctctttgagattgtattacgcaagaac
tggcctctgatgtccggaagagtactgcgtgtttccaacatgatcgaacaacgagtgtgg
gactcgcagcatccgttacggcagtttgccactcttggtcaagacattctcattaagttg
gaagagaagaaattatcacttgagcgactgcgtgaaatggacagcaaagaaattggattt
atgattcaaaatcagcgatcgggaccgatcgtgaaacggaacgcgtcagaattcccttat
ttagaggtggatgccactgttcaaccaatcacacgaacggtattacgtatccggctttgc
atccggcctgatttccgctggaacgacagaatccacggcctctcgtctgaacccttttgg
atgtgggtagaggatcctgaaaacaatacgacatatcattacgagtctatttcgctaagc
aagaagcaagtaactcgcagagaagagcaagtgattgtgttcaccatccccattttcgaa
ccactaccatcgcagtactacatccgcatagtcagcgatcgttggcttcgctgcgaaact
actttcccaatctcgttccaacaactcatccttcccgaacgccatcctccacatacggga
ttgctagacctgaaaccgttgcctgtcactgcgctaaagaatccagagtggcaaagcctc
tactcgtttccatatttcaatcccattcagacccagctattccatgttttgtatcacact
gaccataacgtcttgttaggcgcaccaactggttcgggaaaaaccattgtggctgagatt
gcaatgttccgtgtctttcgggaataccctaaaagcaaagtggtttacattgcccccatg
aaagcgctggttcgcgagcgaatggaagattggcgagaacgtttaggccgtcgactgggc
aagaatgtcgtagaattgactggagacgtcacacctgacgtcagggccataagtcgggcg
gacgtgattgttactacgccggaaaaatgggacggtgtgagtcgatcttggcaaacgcgt
gattatgttcgcgctgttgcgctcatcatcatcgacgaaatccatttgctgggtgaagat
cgtggcccggttctagaagtcatcgtgtcccgtaccaatttcattgcgtcgcacactggc
cgttctctacgccttatcggtctgtctactgccgtggcgaatgctcgtgatttggctgat
tggctcaacattggacaagtgggactctttaatttccgaccatccgtccgtcctgtccca
ttagaagttcacatctccgggttcccaggcaagcattattgccctcgtatggctacgatg
aataaaccaacgttccaggccatcaagcaacattctccagataagccggtgttagtgttt
gtctcgtctcgacgtcagacaaggttgacagccttggatttgattggttatctagcggca
gaagatagtcctcgacagtttgttcgtatgccagaaagagacatggaacaactaaccatt
tccatcaaggatccaaatctcaagttgactctttcgtttggtgtcggcatccatcacgct
ggtctgacagagaaagatcgtcgtttggtggaagagttgtttgtcaaccaaaaaattcaa
gtgctgattgccacggcaacgttagcctggggtgtcaactttcctgcccatcttgtcgtc
atcaagggcaccgaatactacgatggaaaatcgcgtcgctacgttgatatgcccatcact
gatgtcttgcagatgatgggtcgagcaggacgaccacaatacgacgatcatggagttgct
tgtgtttttgtgcacgacatcaaaaaagatttttacaaaaagtttttgtatgaaccgttt
ccagttgaatctagtttgctggacgtgctaccggaacatcttaatgctgaaattgtcgcg
ggaacgatttgttccaaacaggattctattgactatctaacgtggacgtatttcttcaga
cgattgctccaaaatcccgcttattatggtctggaacaactggaacctaccgatgtcaat
cgctatttgacatcgttgattcagcgctcactctcggttctcgaagctgcttcatgtacc
gaaatcgaagaagatggtcgtgtggcgcccacttcactcggccggattgcttcctattat
tacctgagctaccacacgttgcaattgttccgcgatcggctgaatcaagatacaacattg
gaagatctgttgtccattttgagtgatgcgcacgagtatagcgaactccctgttcgccac
aatgaggacctgctcaacaccgaactggccaagaaatgcgttctgcccgtcaatccttac
acctatgattcgccgcacaccaaagctcatttgctcttccaggctcatttttcgcggctg
agtttaccttgtgccgattatgccactgataccaagtcagtgctggatcaagccatccgt
attttgcaagccatgatggatgtgtcggctgaaggtggttggctggccactacgttgcgt
atccagcaactactccagatggtcattcaggctttatggatagatgatccagctgttctg
atgcttccgcatttcaacacgttcattttacctgtccttcgaacccgccaagagcagcta
atgcatttgcccgttttgcaaaaagcctttgccgtggactttgcaaaactgtctaattta
ctgagcatggacttgagcccagatcaaatccaggaagtgcgtcaagttatttccaattta
cccgtcatcgacatttcaatgtccgttttatggggaacaacatcaacgcctctgtccatc
atccccaactgcgggcttcatgatgcgaaatggattgatgtacccgcagatcaagagtgc
cttttggacataactttcgctcgtcagagcctgttggaggccactcctgttgtcacggga
ggggctcgtcctaaaaaatctgccagtgtgcaatctgtggctgctgacaacgggaccaac
caaacgggccgcagccgatctgtttatgctcctaaatttccaaaatcgaaagacgaagga
tggtttttaactcttggctcggttgagaaacaagaattgttagcactgaaacgtgtaact
ttaccgagaatcaaatgctcccatcagttgagtttcacaactcctaagaaactcggtcga
ctgatgttgacattttatttcatgtcagacagctatgtcggtctggaccagcaatatacc
gtctacctaaacgtttgcaaagccaaacgcaccgaattcgatgattacgaggcggataac
gatatctacggcaacaagattgaatga
DBGET
integrated database retrieval system
