Daphnia magna (water flea): 116915360
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Entry
116915360 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
dmk04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116915360
04120 Ubiquitin mediated proteolysis
116915360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116915360
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116915360
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
U-box type E3
116915360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
116915360
NCBI-ProteinID:
XP_032776350
LinkDB
All DBs
Position
LG2:complement(6042162..6046278)
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AA seq
1068 aa
AA seq
DB search
MSELTQEEIRQRRLARLAVMSAGVGPLSSPSLSPATTSAEPSNALFMENGSMLYTPSTPV
KNYPMDIDGSTPRKIEAVDMDTTTPRKIEAMDTDECAITPSKIQSTADNFYTENFLYSTV
TRILRISFQSEKSCIILSSIWPTHPVLTSISYMDSNCVTLTVSNLIMEALDLIMYSVDKP
TQLFQEGSQINCLQYLIDCYSRMEEHEKKYSKKCSISTVKELLVNIKTELCSALALLLEG
FLTEPVKKNYYNMLYEHLKRHTLPSEFFFELVHHLEADTVRFQKIFSPLLLVIRKESQKG
SVSDSSHTAALQVLCDLCECRTGASSSIRPXCNLMIKLGNWLVEPLTEATGREFAKFTFL
GPFLCTSLFAEDDSRIAEKLQTSTSESRPMVSSLQQELELTRNLLHKVFYALLANSGSRE
STLQWIAIALKRNEKRSMINVESRLVAGDGFFLNLAAVMHQLSLKIKLDKVDKFYPFHPQ
SRICSSVANETKIRVNSQESQQWVEQLNQPESGHVWQECKFPTECWFMTLHAQHLAYLPA
ARRHQRRMRALKDYQKLVDEMQNTETEWSQTPAARRNRELIAMWQEQVKKLLLSKPCAEA
GLMDEKLISNYMHFNSMAAELEMQTLCPEIIFATSSSTLPSKATALFANYPEWYVEDIAE
FLLLALQHMPQIVARTMDQMVMTWLLTLVCSANCFNNPYLVAKLVEVLFMMNPAVQPRTE
TLHERLLTHPISQSSLPPALMKFYADVESTGAASEFYDKFTIRFHISIILKSLWQSPVHR
ETVIQELKSGKQFVKFINMLMNDTTFLLDESLESLRRIHEVQEAMENRASWEQQPEEQKE
TRLRQLATDERMCKSYLTLARETVDMLHYLTQHVPDPFLRPELIDRLAAMLNFNLQQLCG
PKCKHFKVKNADNYGWEPRRVLDQLTDIYLHLDSDVFAQALAADERSFRFELFEEAAVRL
ERALIKAPLQIAHWRELSAKAQRIVLQNQKRELDFSDAPEEFRDPLMDTLMDDPVLLPSG
KVMDRAVILRHLLNSSTDPFNRQPLTEDMLMPVEDLKLRIVAWKQKKE
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacttactcaggaagagatacgtcagcgtagattggcccgccttgcagtcatg
tccgctggagtgggtccactgagcagtcccagtttatctccagccacgacttcagcagaa
ccgagcaatgctctttttatggaaaatgggtccatgttgtacactccctccacacctgtt
aaaaactatccaatggacattgatggatctactccacgtaagatcgaagcagtggacatg
gatactacaacaccacgaaaaattgaagccatggacactgatgaatgtgcaatcactcca
tccaaaatccagtctactgctgacaacttttatacagaaaatttcctttactcaactgtt
acaagaattctgcgtatttccttccaatcagagaagagctgcataattttatcttcaatt
tggccaactcaccctgttttgacaagcataagctacatggatagcaactgtgttacccta
acagtgagcaacttgattatggaagcattagacctaataatgtattctgtggacaagcca
acccagttatttcaagaaggttctcaaatcaactgtctccagtacttgattgattgctat
tcaagaatggaagaacatgagaaaaaatattccaaaaaatgcagtatctccacagtaaag
gagctacttgtgaacatcaaaactgagctctgttctgcccttgcccttttgttggaaggc
ttcctcacagagcctgtcaagaagaattactataatatgctttatgaacatcttaagagg
cacactttaccttctgaatttttctttgagctggttcatcatctggaagcagatactgta
cgctttcagaaaatattctcacccttgctcctagttataaggaaagaatctcagaaaggc
tcagtgtctgatagttctcatacagctgccctgcaagtcctctgtgatctgtgcgagtgc
cggactggcgccagttcctctatacgacctntttgcaatctcatgataaagctgggtaat
tggcttgtggaaccacttactgaagcaactggtcgtgagtttgcaaagtttactttcctt
ggtccgttcttgtgtacttcacttttcgcggaagatgactctcgaatcgccgaaaaatta
cagacttcaacaagtgaatcacgcccaatggtttcgagccttcagcaagaattggagctg
acgcgcaacctgcttcacaaggttttttatgcgctcttggccaacagcggatctcgcgaa
tctacactgcaatggatcgcaattgcacttaaacgcaacgagaaacgctctatgattaat
gttgaatctcggcttgtcgccggtgacggattctttctcaaccttgctgccgtcatgcat
caactatcactcaaaattaaacttgacaaggtggataaattttatccatttcatccccag
agtcgtatttgcagtagtgtggcaaacgaaaccaaaatcagagtcaattcgcaagagagc
cagcaatgggtggaacagcttaaccagccagaatctggccacgtttggcaggaatgcaag
tttcctaccgagtgttggtttatgacgttacatgcccaacatttagcttatttgccggct
gctcggcgtcatcagcgaaggatgcgcgctcttaaagactaccagaagctggttgatgag
atgcagaataccgaaacggagtggagccaaacaccagccgcccgtcgaaacagggaactt
attgccatgtggcaagaacaggtgaagaaacttttattaagcaaaccatgcgctgaggcc
ggcctgatggacgaaaaactcatcagcaactacatgcattttaatagtatggctgcagaa
ttggaaatgcaaaccctttgtcccgagattatcttcgccacaagcagctcaactcttcca
tcgaaagctacagctctatttgcgaactacccggaatggtatgtggaagatattgccgaa
ttccttctgttggccctgcaacatatgccccaaattgttgcacgaacgatggatcaaatg
gtcatgacgtggttgcttaccctggtttgttcagccaattgtttcaacaacccctatctg
gtagccaagctggttgaagtgctctttatgatgaatcccgcagtccagcctcgaacggag
acgttacacgagcgattgttgactcatccaattagtcaatcctctttgcctccggctctg
atgaaattctatgcagatgtagaatccactggagcagcatcagaattttatgacaagttt
acaattcgatttcacatcagcatcatattgaagagtttatggcaaagtccagtccaccgg
gaaacggttattcaggaacttaaatcaggcaaacagtttgtcaaatttatcaacatgttg
atgaacgataccactttccttctggacgaaagcctcgagtcactacgaaggattcacgaa
gttcaagaagcgatggaaaaccgcgctagctgggaacaacaacccgaggagcagaaagag
acgcgattgcggcagcttgccaccgatgagcgtatgtgtaaatcctacttaacacttgct
cgtgagacggttgacatgcttcattatttgacgcaacatgtacccgatccattcttgcgt
cccgagctgattgatcggttagcagcgatgcttaacttcaatttgcaacagctctgtggg
ccgaaatgtaaacattttaaagtgaaaaacgccgataattacggatgggaacctcggcgc
gtgttggaccaactaactgatatctatcttcatttggactctgatgtgttcgctcaagcg
ctagcagcggatgagcgatcgttccgttttgaactctttgaagaagcagccgtacgctta
gagcgagctctaatcaaagctcccctccaaattgcacactggagagaactttctgcgaaa
gcgcagcggatcgtccttcaaaatcaaaagcgcgagcttgatttcagtgatgcaccggaa
gaattccgtgatccactgatggatacgctaatggacgaccccgtcttgctcccaagcgga
aaggttatggatagagccgttatcctccgtcacttgctcaattcgtccactgatccattt
aatcggcaaccccttactgaagacatgctgatgcctgttgaagatttgaagctccgtatt
gtggcttggaaacagaaaaaggaatga
DBGET
integrated database retrieval system
