Daphnia magna (water flea): 116915366
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Entry
116915366 CDS
T07514
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116915366
Membrane trafficking [BR:
dmk04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116915366
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
EGF_3
Syndecan
Glycophorin_A
EMC6
Motif
Other DBs
NCBI-GeneID:
116915366
NCBI-ProteinID:
XP_032776359
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Position
LG2:complement(5679525..5685634)
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AA seq
883 aa
AA seq
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MLSYREPGSTILLIILLFMCLKTAVAGEVCASHQFECASGRCIPFSWSCDGENDCDDSSD
ENEHCHGSVHCADTEFQCLVGKRCIPLRWQCDGEPDCEDLSDEDPTKCQEKKCTEDQFAC
KSRAGECIPLPWVCDKNADCSDATDEDGCNVNCTADEFTCANGRCIQKRWFCDGQDDCGD
HSDEGDHCPEDTCPPDSNFNCGDNVCVPNKRKCDGFVDCANGADEADCPSLALNGTNQCT
AQEFQCQNGIDCIHSSWQCDGDHDCPDGSDEQNCSLSTCRPDQFRCDDGECIPGHLQCSG
AAECNDTSDEASCNSTTSVGCSPETEFDCGDGMCISLDKVCDGVNDCGQWEDEPKGKCNV
NECALNNGGCLHTCIDTTWGFRCECHPGYALSNNSTCVDIDECLDPGTCSQTCTNEKGSF
KCECISGYTRDPHDHTHCKANEGHSALLFTHGTDIRRFALDRRDLTSIVNETRSSTALDF
HFESGMLYWSDINDRRIYKAPIDEGETKTVVASGHVVKADGLAVDWIYRHLYWTDSSKES
LISSIQVSDLDGGSRKTLLTEGLQQPRSIAVDPLEGWLYWSDWGGASRIERSGLDGSHRQ
VLIDSHIKWPNGITLDRVDRRLFWVDAKMDMIGSCDYDGSNRRVVLSSGPAIGHPFAVTV
FEDWIYWTDWDHRTIMRANKFNGKNATSVTQTHSSQMPMVVHVYHSYRQPSGPNHCMPFN
GRCSHLCLPAPQINDRSAKISCGCPDNFQMLDDGLNCVETHLLLRNTSTTSTTTSTTIAV
KVNDTLKSNSEDVLQSLANDSGTITGLIIGTVAGIIILIALVGFFVYRHVVLRNATSMNF
DNPVYRKTTEDKFSLSKNPPSGRSKASAPEVEPLNHPGTNEYV
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcctaccgtgaacctggctctaccatattattgatcattttgctgttcatgtgt
ctaaaaacagctgtagctggtgaggtttgtgcttcgcaccagtttgaatgcgcttctggc
cggtgcattcctttctcttggtcttgtgatggcgaaaacgattgtgatgattcatccgat
gaaaatgaacactgccatgggtcagtccactgcgccgataccgagttccaatgcttagtt
ggaaaacgctgcataccgctgcgatggcagtgcgatggagaaccggattgcgaagatctg
agcgacgaggatccaacaaaatgccaagaaaaaaaatgtactgaagaccagttcgcctgt
aaaagccgagccggtgaatgtatcccattgccatgggtctgcgataaaaatgccgattgt
tcagacgcgacggatgaggatggatgcaatgtgaattgcacagctgacgaattcacttgt
gccaatggtcgctgcatacagaaaagatggttttgcgacggacaagacgattgtggcgac
cattcggatgagggcgatcattgcccggaagacacatgtccacccgacagcaatttcaat
tgcggtgataatgtttgtgttcctaataaaaggaaatgcgatggcttcgttgattgcgca
aatggagccgatgaagcggattgcccgtccttggcacttaatggaacgaatcagtgtacc
gcgcaagaatttcaatgccagaacggaattgattgcatccattcttcatggcaatgcgat
ggtgatcatgattgtccggatggatccgatgaacagaattgctctctttcaacttgcaga
ccggatcagtttcgatgcgacgacggtgaatgtattccgggtcatttgcagtgcagtggc
gctgccgaatgcaacgacacgtctgacgaagcgtcctgcaacagcaccacctcagtgggt
tgtagtcccgaaaccgaatttgactgtggagacggaatgtgcatcagtcttgacaaagtc
tgcgacggagtcaacgattgcggccaatgggaggatgaacctaagggcaaatgcaatgtc
aacgaatgtgctttaaataacggcggatgcctacatacttgtatagatacgacttgggga
ttcagatgtgaatgccaccctggttacgcgctttctaacaactcgacttgtgttgatatt
gacgaatgccttgatcctggaacatgctcccagacgtgcaccaatgaaaaaggcagtttc
aagtgcgaatgtatttcgggttacacacgagacccacacgaccatacgcattgtaaagct
aatgaaggacactctgccttgctcttcactcacgggaccgatatccgtcgctttgcgctc
gaccgtcgggatttgacgtccattgtcaatgagacgcgcagttcgacagctctcgatttt
catttcgaaagtgggatgctttattggagtgatatcaatgacaggcggatatacaaagcg
ccgatcgatgaaggcgaaacaaaaacggtggtggcttcaggccatgtagtcaaagccgat
gggcttgctgttgactggatttatcgtcacttgtactggactgattcttccaaagagtcc
ttgatatcttcgattcaagtatcggatttggacggtggatcccgcaagacgttgctgaca
gaaggactacagcaaccaagatccatcgccgttgatccgttggaaggctggctttattgg
tccgattggggtggagcatcacgcattgaacgctctggtcttgacggctctcatcgacaa
gtattgattgattcacacatcaagtggcccaacggcatcacactggacagggtagatcga
cggctgttttgggtcgacgccaagatggatatgatcggtagttgcgattacgatggatct
aacagacgcgtcgtgctttcttccgggccggctattggccacccttttgctgtaaccgtt
tttgaagactggatctactggacggattgggatcatcgcaccatcatgcgcgccaacaag
tttaatggcaaaaacgctacatccgtcacacaaacccattcgtcacagatgcccatggta
gtccatgtttatcattcgtatcggcaaccaagtggacccaatcactgtatgcccttcaac
ggccgttgctcccatctctgcttgccagcgccccagatcaatgaccgttcggccaagatt
tcctgcggttgtccagacaactttcaaatgttagacgacggacttaactgtgtcgaaaca
caccttttgttacggaatacttcaacgacatccacaactacatctacaacgatagcagtg
aaagtcaacgatactctaaaatctaattcagaggacgttctccagtcgctagcaaacgac
tctggaaccattaccgggttgataattggcacagtcgctggaatcatcattcttattgcc
ttggtgggtttcttcgtataccggcatgtggtgctacgaaacgcgacgagtatgaacttt
gataatcccgtgtaccggaaaacgaccgaggacaagttttccctgtcgaaaaatccacca
tccgggcggtcgaaagcgtcagcgcctgaagtggaaccgctcaaccatccaggcactaat
gaatacgtttga
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