Daphnia magna (water flea): 116915631
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Entry
116915631 CDS
T07514
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K19479
collagen type X alpha
Organism
dmk
Daphnia magna (water flea)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
116915631
NCBI-ProteinID:
XP_032776649
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Position
LG2:5448301..5450892
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AA seq
539 aa
AA seq
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MKAVAILPVLVAIAVAAPQYGPAPQAVEPAPQVSAEQWASLNPYGNNVNAYPAEERPQIE
EIQRQWAKFIEYLPWLKGPAGPPGPPGAPGAGGSSGGGYGGSFSQSQQATVVGPPGPPGP
PGPAGPKGETGNAGNPGTPGNPGPQGPSGLNGAPGGPGPAGERGSNGAPGAPGGPGFPGA
KGAAGLNGAPGLNGAPGAPGKDGFNGLPGFAGPKGEPGAPGITLPSNQPGPAGAPGAPGK
NGAPGFPGGPGPAGPVGPAGPVGPAGRPGTNGFPGGPGPKGEAGTPGFPGGPGKDGRPGA
PSTQPGPVGPQGPAGPPGFNGAPGKDGLPGGPGAPGKDGLPGGPGFPGGPGQPGKPGKDG
LNGAPGAPGFPGGPGPAGPQGKPGAPGFPGGPGGPGPAGPQGGPGPQGKPGSPGFPGGPG
PAGPQGGPGPQGGPGPQGPSGTPGGPGPAGPAGPAGAAGAVTTIQAPAYEAPAQQPAYQA
PVEQPAYQAPVEQPAYQAPAQQPAYQAPAQQQSWSAPVQSSWSAPAQSSFQPLQSAYGR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagtagcaattcttccggttctggttgcgatagcggtcgctgctccgcagtat
ggccctgctccacaggctgtagagccagctcctcaagtttcggctgaacagtgggcatca
cttaacccttatggtaacaatgtcaacgcttaccctgccgaagagagaccgcaaatcgaa
gaaatccagcgacaatgggccaagttcatcgagtacctgccttggcttaagggacctgct
ggtccaccaggcccacctggtgctcctggtgctggcggaagctctggtggtggttatggt
ggtagctttagccaatctcaacaagctacagtagttgggccccctggcccaccaggccca
ccaggacctgctggacctaagggagaaactggaaatgctggcaatcccggaactcccggc
aatcctggaccacaaggaccatctggccttaatggagctcctggtggacctggaccggct
ggcgaacgtggttcaaacggagcccctggtgcccctggaggacctggtttccccggagct
aagggcgctgctggtctcaacggagcacctggcctcaacggagctcctggagcccctggc
aaagacggtttcaacggattacctggatttgcaggacctaaaggtgaaccaggtgcacct
ggcataactttgccctcaaaccaacccggacctgctggagccccaggtgcccctggtaaa
aatggagctcctggcttccctggtggtcctggacccgccggccctgtcggacctgctggc
ccagttggacctgctggccgacctggtacaaacggattccctggaggccctggtcctaaa
ggcgaagctggaactcctggttttcccggaggccctggtaaagatggccgtcccggtgca
ccaagcactcaacctggcccagttggccctcaaggacccgccggaccccctggctttaac
ggtgctcctggcaaagacggtctccccggtggaccaggtgccccaggcaaagatggactt
ccaggcggacctggtttcccaggtggacccggacaaccaggcaaacctggaaaggacggt
ctcaacggagctccaggagcacctggattccctggtggaccaggacctgcaggacctcaa
ggtaaaccaggtgctcctggcttccctggcggccccggtggcccaggaccagctggacct
caaggaggacccggaccacaaggtaaaccaggttcaccaggcttccccggcggacctggc
cctgctggacctcagggaggacccggaccccaaggaggacctggacctcagggaccatct
ggcacacccggtggtccaggacctgctggcccagctggccctgccggagcagctggtgcc
gtgaccacaattcaagccccagcctatgaggctcctgctcagcaacctgcttatcaagca
ccagttgagcaacccgcttaccaagcaccagttgagcaacccgcttaccaagcaccggcc
caacagcccgcttaccaagcaccggcccaacagcaatcttggtcggctccagttcaatcg
tcgtggtcggcccccgctcagtcctcattccagccgttgcaatccgcctacggacgataa
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