Daphnia magna (water flea): 116915732
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Entry
116915732 CDS
T07514
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116915732
Membrane trafficking [BR:
dmk04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116915732
BRITE hierarchy
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GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR
PPR_3
Papo_T_antigen
PPR_long
Motif
Other DBs
NCBI-GeneID:
116915732
NCBI-ProteinID:
XP_032776744
LinkDB
All DBs
Position
LG2:7299318..7308795
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AA seq
1916 aa
AA seq
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MEDKQIADYFVVAGFTDKSMPLEDFSFDGNQLKSTYDQAPITDITVIIPSLGEGIPPGFT
CIEYTPTGLTADLNYGSIRSPEVFLCYRRSRERPPLFDIGVLYQGKEQLMSDAEVVLSTP
YGRPANVNNSANQHTYVTYRRAPDTAPCNDLVVSDICVVVTSKGEQPPHAYCMIKKNLNK
GMLGADVYLCYKKSMNKPRYIAYRPGIQARFPEEDIPHNPMPDSVPLFCLPMGATLEWWP
INAATPKPVFSTFVLTVSDAAEKIYGSAVTFYERYPEEKMTKEQKAWLDMEDVNDGTTEK
DYTVNTIKSICILSHFPFFDTFEKFLRFLHKVAHSGPYPVPLERYITHFMYDVPFPSPQR
PRILIQLSATDRIALAQLEDLPLPRRGASFKSMLLNLGPDGCLQLLLLALTEQKILIHSL
RPDVLTATAEALATSIFPFKWQCPYIPLCPLGLSDVLSAPLPYLIGVDSRFFDMYDPPAE
VSCVDLDTNTISVSEEKKTLLSVKLLPKKAARTLRATLQYLYEKLYSTFWSERGKRGDDS
DSSLDRDFKIKKKELLLELEIQEAFLKFMASILRGYRSFLLPITKAPTVGATDPNSLFDL
QGFLRSRDKAYVKFYAFMMKTQMFIRFIEERSFVSDMDSSLAFFDECSDKTDLDDGETKL
LELDDSHHSERTVFVTPPEPVGLPPAVTYTYQQFGTLNPDLMLRPVDESSLDPSLVGSST
KPRSNSGNACGSALPPPSSPLARRTKHEIKNSQKFAKKYAETPMLWAKCLLNTCFSIWFI
HLPSHILASNSKLTTLRSAYAILVAMQKLRVLPADEVCYRVMMQLCGVLGQPVLAVKVLF
EMKRHGVQPNAITYGFYNKAVLEAHWSSDMANHSRLLWNKLRNVVTAAGLFRQAGRKAAQ
RRLSQYSSTDEGDLASNSDGDGLSRTSVDSAQEGHHTGGVGGAPIIYRNCAVTSSQSDIG
YSSMKEDGKAHQKPKSSSQKDLPTALKAEESVDICGSRAVDNNTAKSAAVVPVTVRLDFS
QSDEFRTRVGSIVRKSANAVPHKSVDSAAGVLMSSLGSGGGTLSPTEATELKAALDVAGH
NLSHPSPQQAKGATLPREKSAVTPIASLTSTPDSSSQTKSSSHSASTASLFRSASLRLGG
MFVSPLESHFSPAKTALADRLQWARSSIRKKLDMGSQHDTASESTVLKENEKEEKMDVKP
QEMVQESGQSTWNRDVNHVDQEDRASNSHLPSDEVAKIIQNSQLTVKTVPTCSPERHTLT
HGDPLGALDIINEVARSTPVSAEISRLKPFVLPDPSVRLFTSSHSTSSSGSSTEDDSSED
DSSEESESEEESDHSHDVSSSASRLSFSRYAGARWSLRKPEFRVNLGAQVLGTALNSLSP
QNLNARKAEFLVGLNNLKSAASSVAKKIDEIKGAIGAGVTVTPSKLSGSGLLADSGSASG
SSALLTVDGPADGSLETWSSWTAQWLRRASSADLASQQYGSQPATGSATPSEWSTTDGQA
SSNIKGLPSWTETSSQLDRLCASMRLPNSGRRQRPGEELPVAIEVIMTSCSKCHNCSSIL
YDEEIMAGWTPEDSNLNTRCQHCKKLLVPFLTTHLRDYRSHPPSAVQRMFSNLTPGVSQE
SVISSSHSRNGSDGGNRPIKGEEHVSKSTNPEKVHPVPLVSPVSFGPISVPYLSPLVLRR
ELEGILEQEGDVCLTQASFVDQHSIIYWNMLWYFERVGLMSHMAALILRANIGLNETNNN
NDSEATEVACRVHASWSSADERNISVKTKWDNSRLHDELGPPCYALWQQADEQHSPLVSA
LVTDNQAFQRSFLDELLRGIQYNDMLRPLKQLSSELVKRKTKTGMIARHHGIYRELLFLS
FVAIGRENIDQIAFDREYRLAYDRLDAQSMATLGKVDSPPSIASVFCRHFFRQLEL
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaacagattgctgactactttgttgtagctggattcacagataaatcaatg
ccacttgaagacttttcgtttgatggaaatcagcttaagtctacttacgatcaagcaccc
atcacagatattactgtcatcatcccatcccttggtgaaggcatcccacctggttttact
tgcatagaatacaccccaactggtttgacagctgatctcaactatggaagcatacgaagc
cctgaagtttttttgtgttaccgtaggagtcgtgaacgcccaccattgtttgatattgga
gtattgtatcaagggaaggaacaattaatgtcagatgcagaagttgtcttgtcaacacca
tatggaaggccagctaatgtaaataattcagccaatcaacacacatatgtaacctataga
agagccccggatacagccccctgcaatgatcttgtggtgtcagacatttgtgtggtcgta
accagtaaaggcgaacaacctccacatgcatattgtatgatcaaaaagaacctcaacaag
ggaatgttgggtgctgatgtctacctttgctacaagaagtcaatgaacaaaccacgctac
atagcctatagacccggcattcaagcacgtttccctgaagaggacattcctcataatcca
atgcccgactccgtccctttattttgtttgccaatgggcgctacattagaatggtggccg
atcaacgctgccactccaaaaccagtattctccacgtttgtcttgactgtatcagatgcc
gcagagaagatatacggctcagccgtcacattttacgagcggtatcccgaagaaaaaatg
accaaggaacaaaaagcctggcttgatatggaggatgtaaatgatggaacaactgagaaa
gactataccgtcaacacaattaaatctatctgcatcctatctcattttcctttctttgat
accttcgaaaaatttctacgatttctgcacaaggtggctcattcagggccttatccagtt
ccacttgaaaggtacattacacatttcatgtacgacgtgccgtttccatcaccgcagcgc
ccgcgaatcctcattcaactatcggctaccgaccggattgcactggctcagttagaagac
ctcccattaccccgacgtggggcaagctttaagagcatgttgcttaatttgggaccggac
ggatgtcttcagctactacttttggccttaacagagcaaaagattttgatccattcgctg
cggccggatgttttgacggcaacagcggaagccctggctacgagcatctttccattcaag
tggcagtgcccttatatcccgttgtgcccgctcggactcagcgatgttctaagtgcaccg
cttccttatctcattggggttgattcgcgtttctttgatatgtatgacccaccagcggaa
gtcagctgcgtcgaccttgatacaaacaccatttctgtgtcggaggagaaaaagacatta
ctttcagttaagctactgcccaagaaagctgctcgaacgttacgggcgacactgcaatat
ctctacgaaaagctatattccactttttggagcgaaagaggcaagcgtggagatgattcc
gattcgtctttagaccgagatttcaaaattaaaaagaaagagcttttattagaattggaa
attcaagaggcttttctgaagtttatggcatccattctacgtggataccgttcctttttg
ctacccatcactaaagcgccgactgtgggtgcgacagatcccaactccctctttgatcta
caggggtttttacggtcccgtgacaaagcctatgtcaaattctacgcgtttatgatgaaa
acgcagatgtttatccggttcatcgaagagcgctcctttgtctctgatatggattcgagt
ttagccttctttgacgaatgctcggacaaaaccgatttggatgatggtgaaactaagttg
ctggagcttgatgattcacatcacagcgaacgcacagtttttgtcactcctccggagcca
gtcggccttccacctgctgttacctatacttatcagcaattcggtaccttgaatccggat
ttgatgcttcgaccggtggatgaatcgtcactagacccgtcgttagtcggcagtagcacg
aaaccgcgatctaacagtggaaatgcatgtggatcggctttacctccaccaagtagtcct
ttagcccgaagaacaaagcatgaaattaagaactctcaaaagttcgccaaaaaatatgcc
gaaactccaatgttatgggcgaaatgtctgcttaatacttgcttcagtatctggtttatt
catcttccaagtcacattttggcatcgaactccaaactaacaaccttgagatcagcttat
gcgatactagtggccatgcaaaagctccgtgtccttccggccgatgaggtctgctatcga
gtgatgatgcaactttgtggcgttcttggtcaacctgttttggcggtcaaagttctcttt
gaaatgaaacgacacggagtacaaccaaatgccattacctatggtttctataacaaagcc
gtactcgaagctcactggtcgtctgatatggcaaaccatagcagattactttggaataaa
ttgcggaatgtagtgactgcggcaggactcttccgtcaagcgggaagaaaagctgcccag
cgaagattatcccagtattcctcgacagatgaaggcgatctagcttccaattctgatggg
gacggactttcacggacgtccgtcgattcagctcaagagggccaccacacgggcggagtc
ggaggtgctcccataatatatcgaaactgcgcagtgaccagtagtcaatcggatatcggt
tatagttccatgaaagaagatggaaaggctcatcaaaaaccaaagagttcaagccagaaa
gatctaccaacggctctgaaggctgaggagtcggttgacatttgtggttcccgtgcagtc
gataataatacggccaaatcggccgccgtcgtaccggtcaccgtccggctggatttttcc
cagtcggatgagttccggacccgagtgggaagcatcgtcagaaaatctgccaacgccgtt
cctcataaaagcgttgacagtgcagctggggttctaatgagcagcctgggcagcggtggg
ggaaccttaagtcccaccgaagctaccgaacttaaagcagccctggacgttgccggtcac
aacttgtctcacccctcaccacaacaagccaaaggagccacacttccgcgggagaaaagc
gctgtaacaccaattgcgtctcttacctcaacaccagactcttctagtcagacaaagtcg
agttctcacagtgcatcgacggcctccttatttagatcggctagcctacgcttgggtggg
atgttcgtttccccattggaaagccattttagtcctgcaaaaactgccttggctgatcga
ctgcagtgggcacgcagtagcatccgtaaaaagctggatatgggaagccagcatgacacc
gcgtcagaatcaacagtattgaaagaaaacgaaaaagaagaaaaaatggacgtgaaacct
caggagatggttcaggaatcaggtcaatcaacatggaatagggatgttaaccatgtggac
caagaggaccgcgcatccaattctcatttacccagtgatgaagtggcaaaaatcatccag
aattctcaacttaccgtcaaaaccgttccgacttgcagtcctgaacgacacactctaacc
catggtgatccattgggtgctctggatatcataaacgaagtcgcacgttcaactccagtt
tctgcagaaatttcccgtctgaagcctttcgtgttgccagatccaagtgtcagacttttt
actagtagccacagcacaagtagcagtggtagcagcactgaagatgatagcagcgaagat
gacagtagcgaagaatctgaatcggaagaagaatcggatcattctcacgacgtctcatcg
tcggcctccaggttgtcatttagtcgctacgcaggagctcgatggagcttacgcaaaccg
gaatttcgagtcaacttgggcgctcaagttttgggcacagccctcaattctcttagtcca
cagaatctaaatgcacgtaaagccgagttcttggtgggtctgaataatctgaaatctgct
gcctcaagtgtagccaaaaaaattgacgagatcaagggcgccatcggagctggagtgaca
gtcactccatcgaaactttctggttctggattgttggcggattctgggtcggcaagtgga
agcagtgctctgctcacggtagatggacccgctgacggttctttagaaacttggagctct
tggactgcccagtggctacgtagagcatcttcagctgatttggcttcccagcagtatggt
agtcaaccggctaccggatcggccacgccctctgaatggtccacaactgacggccaagcc
agctctaacataaaaggactgccatcttggactgaaacgagctcccaattagacagattg
tgtgcatcaatgcgcttgccaaatagcggtagacggcagcgtcccggtgaagagttgcct
gttgctatcgaggtgatcatgaccagctgttccaaatgtcacaattgctcttctattctt
tatgacgaagagatcatggcgggttggacaccggaagactccaatcttaacaccagatgt
caacattgcaaaaagctgttggtgcctttccttactacccatctccgcgattaccgctct
catcctccttcagccgtccagcgaatgttttctaatttgacgccgggtgtaagccaagag
agcgtcatatcctcgtcacattctcgtaatggcagtgacggaggtaatagaccgatcaaa
ggagaagaacatgtgtcaaaatcgacaaatccggaaaaggtccacccagtccctcttgtt
tctccggtatcgtttggacccattagcgtgccgtatctgagccctttggttcttcggaga
gaattagagggtatccttgaacaggaaggtgacgtctgcctgacgcaagcaagcttcgtt
gaccaacattcaatcatatattggaatatgctttggtatttcgaacgagttggcttaatg
tcccacatggcagctcttatcttacgtgcaaacattggccttaatgagacgaataacaat
aacgacagcgaagccaccgaagtcgcctgtcgtgtacacgcttcgtggtcgtctgctgat
gaacgaaacatttctgtgaagactaaatgggataattccaggctacatgacgagcttggt
cctccttgctatgcattgtggcagcaagctgacgagcagcattctccgttggttagcgca
ctggttactgacaaccaggcgtttcaacgaagtttccttgatgaactgctacgtggcatc
cagtacaacgacatgctccggccactgaaacagctttcatctgaacttgttaagcgcaaa
acgaaaacaggaatgattgcacgacaccatggaatctaccgcgagctgcttttcctctcg
ttcgttgctatcggacgagaaaacatcgatcaaatcgcatttgatcgagaatatcgtcta
gcttacgaccgccttgatgctcagtctatggctacgctgggtaaagttgatagtcccccg
tccattgcttcggtgttttgtcgccattttttccggcaactagaattgtaa
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