Daphnia magna (water flea): 116915813
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Entry
116915813 CDS
T07514
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116915813
04121 Ubiquitin system [BR:
dmk04121
]
116915813
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116915813
Membrane trafficking [BR:
dmk04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116915813
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116915813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-Nse
TBX2-3_TAD
zf-RING_6
zf-C3HC4_3
DZR
Motif
Other DBs
NCBI-GeneID:
116915813
NCBI-ProteinID:
XP_032776834
LinkDB
All DBs
Position
LG2:complement(9167924..9170906)
Genome browser
AA seq
427 aa
AA seq
DB search
MAAVSEPNSSNRFFCHRCNVEIPHVLPGFKCPRCNSGFIEEMELPPQQSFSDESSDDGDA
EMVTSIGELFTHNFLGSLRDAHHTTPQAASNGEREDEEPSSTSSGASSGTATRRRRQHVA
FNLPVRSTRRRTNSDRQMAPLENIIQEFIINLSGFDFDPAALQAQGSPMFMYGNPGDYAF
GRAGLDAIITQLLNQMDGTGPPPMAKDKISQIPTVEIDQQQIEQSLQCSVCWEDFKLAEP
VRKLVCEHYYHTQCIVPWLQLHGTCPICRKALNDDSGSAESESASAPEPSTSSNSSNNTN
SSSGISWLNSARHAQTGAGSVISSLIGSITNALSGGQSSSNSPYHSSSSAASSSQQPQGR
EISISPLSPFARQHSYNLRSSRDRPGGQESNDEDEDSSNGASAHQRTHHRPTGRGRGQPN
PFEDDYD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtttcagagccaaactcatccaaccggttcttttgccatcgatgtaacgtg
gaaattccgcatgtccttccgggtttcaaatgtccaagatgtaacagtggcttcattgag
gaaatggagctcccaccacaacagtccttcagcgatgaatctagcgatgatggagatgct
gaaatggttacatctataggagaactcttcactcataactttcttggtagtttacgtgat
gcccaccatactacaccacaagctgccagtaatggtgaaagggaagacgaagagccttca
tccacatcttctggagctagcagcggtacagcaacacgacgaagaagacaacatgtcgct
tttaatctgcctgtgcggtcgactcgacgaagaaccaacagcgatcgtcaaatggctccc
ttggaaaatattattcaggaattcattataaacctatcgggatttgattttgatccagca
gcgttacaagctcaaggctcacctatgttcatgtatggcaatcctggtgattacgccttc
ggccgcgcaggcttggatgctattatcacgcagttattgaatcaaatggatggcactggt
ccaccacctatggccaaagataaaatctctcagatccctactgttgagatcgaccagcaa
caaatcgaacaaagtttgcagtgctcagtttgttgggaagattttaaacttgctgaacca
gtcagaaaactagtgtgtgagcattattatcacacacaatgcattgtgccatggctgcaa
ttacacggaacctgcccaatatgtaggaaggctctcaacgatgactcagggtcagcggaa
agcgaaagtgcatctgccccagaaccaagtacgtcatctaacagcagcaataacaccaac
agttccagcggaatttcgtggttgaacagtgctagacatgcccaaacaggagccggatct
gtcatttcttccttgattggatcaatcaccaacgcgcttagcggaggacagtcatcgtcc
aattccccgtatcattcatcctcttcagcggcttcgtcgtcccaacagccgcaggggcgt
gagatttcaattagtcctctctctccttttgcccggcaacattcttacaacttacgcagc
agcagagatcggccgggaggtcaggaaagcaatgacgaagacgaagactccagcaacggt
gcaagtgctcatcagcggactcaccatcgtccaacgggaagaggccgtggccaaccgaat
ccctttgaagacgattatgattaa
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