Daphnia magna (water flea): 116915837
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Entry
116915837 CDS
T07514
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03030
DNA replication
dmk03410
Base excision repair
dmk03420
Nucleotide excision repair
dmk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116915837
03410 Base excision repair
116915837
03420 Nucleotide excision repair
116915837
03430 Mismatch repair
116915837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmk03032
]
116915837
03036 Chromosome and associated proteins [BR:
dmk03036
]
116915837
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116915837
DNA replication proteins [BR:
dmk03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116915837
DNA Replication Termination Factors
ELG1-RFC complex
116915837
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116915837
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116915837
Check point factors
HRAD17(Rad24)-RFC complex
116915837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
nSTAND3
AAA_11
AAA_18
Rad17
AAA_24
Mg_chelatase
AAA_19
AAA_assoc_2
RuvB_N
MeaB
NTPase_1
ABC_tran
AAA_5
ResIII
SNF2-rel_dom
ATPase_2
CbiA
RNA_helicase
MipZ
SRP54
AAA_23
AAA_28
AAA_7
AAA_30
AAA_3
AAA_25
DnaB_C
MCM
Castor_Poll_mid
IstB_IS21
AAA_2
bpMoxR
KTI12
Motif
Other DBs
NCBI-GeneID:
116915837
NCBI-ProteinID:
XP_032776863
LinkDB
All DBs
Position
LG2:1837464..1839523
Genome browser
AA seq
344 aa
AA seq
DB search
MEIDVNESSMSVDPTKTSGKKDNMPWVEKYRPVTFKEIVGNEDAVGRLDVFAREGNTPNI
IIAGPPGVGKTTTILCLARTLLGQNYKDAVLELNASNERGIDVVRNKIKMFAQQKVTLPK
GRQKIIILDEADSMTEGAQQALRRTMELYSKTTRFALACNTSDKIIEPIQSRCAMIRYGK
LSDAQILAKVIEVCQLEHVSHTDDGLEAIVFTAQGDLRQALNNLQATVQGFGHVNSENVF
KVCDEPHPMLIKDMIDHCAKGKIDDAYTIMSHLYELGYAAEDIISSVFRVCRNHNLPEYI
MLEFIQEIGLTHMKIAQGLGSLLQMSGLLARLCKRVIAPEKFSM
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgacgttaatgagagctccatgtcagtcgatccaacaaaaaccagtggaaag
aaggacaatatgccatgggtagaaaaatatcgcccagtaactttcaaagagatagttgga
aatgaagatgcagttgggagattggatgtttttgcaagagaagggaatacccctaacatc
ataattgctgggcctcctggtgtgggaaaaacaacaaccattctttgcctggctcgcacc
ttacttggacaaaactataaagatgctgtattagaacttaatgcatcaaatgaaagagga
attgatgtcgtgaggaacaaaataaaaatgtttgcacaacaaaaagttactttaccaaaa
ggcagacaaaaaattattattttggatgaagcagacagcatgaccgaaggtgcccagcag
gctctccgacggaccatggaactgtacagtaaaacgacgcggtttgcattggcctgtaat
actagtgataaaataatagagccgattcagagtcgatgtgccatgattaggtatggaaaa
ttaagtgatgcgcaaattcttgcgaaggtgatagaagtctgtcaattagaacatgtcagt
cacactgatgatggactggaagcaattgtctttacggcacaaggggatttacgacaggca
ttaaacaatctgcaggcaacagtacaaggatttggtcacgtaaacagtgaaaatgttttt
aaggtatgtgatgaacctcatcccatgttaatcaaagatatgattgaccactgcgcgaaa
ggaaaaattgacgatgcctacacgatcatgtcgcatttgtacgaattgggatatgcagct
gaagacatcatatccagcgtgtttcgagtgtgccgaaatcacaatcttccagaatacata
atgcttgagtttatccaggaaatagggttgacacacatgaaaatagctcaaggactcggt
tcgttactgcaaatgtctggcttgctagcgcgattgtgcaagagagtcatcgcccccgaa
aagttttccatgtga
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