KEGG   Daphnia magna (water flea): 116915837
Entry
116915837         CDS       T07514                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03030  DNA replication
dmk03410  Base excision repair
dmk03420  Nucleotide excision repair
dmk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116915837
   03410 Base excision repair
    116915837
   03420 Nucleotide excision repair
    116915837
   03430 Mismatch repair
    116915837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dmk03032]
    116915837
   03036 Chromosome and associated proteins [BR:dmk03036]
    116915837
   03400 DNA repair and recombination proteins [BR:dmk03400]
    116915837
DNA replication proteins [BR:dmk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116915837
  DNA Replication Termination Factors
   ELG1-RFC complex
    116915837
Chromosome and associated proteins [BR:dmk03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116915837
DNA repair and recombination proteins [BR:dmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116915837
  Check point factors
   HRAD17(Rad24)-RFC complex
    116915837
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 nSTAND3 AAA_11 AAA_18 Rad17 AAA_24 Mg_chelatase AAA_19 AAA_assoc_2 RuvB_N MeaB NTPase_1 ABC_tran AAA_5 ResIII SNF2-rel_dom ATPase_2 CbiA RNA_helicase MipZ SRP54 AAA_23 AAA_28 AAA_7 AAA_30 AAA_3 AAA_25 DnaB_C MCM Castor_Poll_mid IstB_IS21 AAA_2 bpMoxR KTI12
Other DBs
NCBI-GeneID: 116915837
NCBI-ProteinID: XP_032776863
LinkDB
Position
LG2:1837464..1839523
AA seq 344 aa
MEIDVNESSMSVDPTKTSGKKDNMPWVEKYRPVTFKEIVGNEDAVGRLDVFAREGNTPNI
IIAGPPGVGKTTTILCLARTLLGQNYKDAVLELNASNERGIDVVRNKIKMFAQQKVTLPK
GRQKIIILDEADSMTEGAQQALRRTMELYSKTTRFALACNTSDKIIEPIQSRCAMIRYGK
LSDAQILAKVIEVCQLEHVSHTDDGLEAIVFTAQGDLRQALNNLQATVQGFGHVNSENVF
KVCDEPHPMLIKDMIDHCAKGKIDDAYTIMSHLYELGYAAEDIISSVFRVCRNHNLPEYI
MLEFIQEIGLTHMKIAQGLGSLLQMSGLLARLCKRVIAPEKFSM
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggaaattgacgttaatgagagctccatgtcagtcgatccaacaaaaaccagtggaaag
aaggacaatatgccatgggtagaaaaatatcgcccagtaactttcaaagagatagttgga
aatgaagatgcagttgggagattggatgtttttgcaagagaagggaatacccctaacatc
ataattgctgggcctcctggtgtgggaaaaacaacaaccattctttgcctggctcgcacc
ttacttggacaaaactataaagatgctgtattagaacttaatgcatcaaatgaaagagga
attgatgtcgtgaggaacaaaataaaaatgtttgcacaacaaaaagttactttaccaaaa
ggcagacaaaaaattattattttggatgaagcagacagcatgaccgaaggtgcccagcag
gctctccgacggaccatggaactgtacagtaaaacgacgcggtttgcattggcctgtaat
actagtgataaaataatagagccgattcagagtcgatgtgccatgattaggtatggaaaa
ttaagtgatgcgcaaattcttgcgaaggtgatagaagtctgtcaattagaacatgtcagt
cacactgatgatggactggaagcaattgtctttacggcacaaggggatttacgacaggca
ttaaacaatctgcaggcaacagtacaaggatttggtcacgtaaacagtgaaaatgttttt
aaggtatgtgatgaacctcatcccatgttaatcaaagatatgattgaccactgcgcgaaa
ggaaaaattgacgatgcctacacgatcatgtcgcatttgtacgaattgggatatgcagct
gaagacatcatatccagcgtgtttcgagtgtgccgaaatcacaatcttccagaatacata
atgcttgagtttatccaggaaatagggttgacacacatgaaaatagctcaaggactcggt
tcgttactgcaaatgtctggcttgctagcgcgattgtgcaagagagtcatcgcccccgaa
aagttttccatgtga

DBGET integrated database retrieval system