Daphnia magna (water flea): 116916014 Help Entry 116916014         CDS       T07514                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism dmk  Daphnia magna (water flea) Pathway dmk04140   Autophagy - animal dmk04148   Efferocytosis Brite KEGG Orthology (KO) [BR:dmk00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     116916014    04148 Efferocytosis     116916014  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:dmk04131]     116916014 Membrane trafficking [BR:dmk04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     116916014 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Fibrillarin Vps39_1 CNH zf-Vps39_C Clathrin GCD14 TPR_Vps41 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  116916014 NCBI-ProteinID:  XP_032777080 LinkDB All DBs Position LG2:15371570..15378225 Genome browser AA seq 1175 aa AA seqDB search MYDAYEALPILEKLPLQIESIAAYDEHLLVGTHQGHLLMYSVLQGASNVHLLRSNKYFAK KPIQQLAVVPEHQILISLSDYLVTVHDLTVFNFPVITSLTKSKGATYFTLDVKRQTSLTG EISVAVRLCVVVKKKLQLFYWKNREFRELGPDLALSDTPRGIGWCRETLCLGFKGEYCLL KLEGEQRDLFPTGKQPEPLVCALQGDKFALGRDEQTIMIDIDGNPCTKYTLTWSERPLLL VEDSPYILGVLTSCIEIRAAEPRLLVQRLELPRARFMTPVISSNGQIYVASPSHVWCLHL VPVHLQLPRLLEDKHFQLAIQLANLSSEPQDIRTQQVQHIQSLYAFSLFQKHNFDESLQL FFKLATDPSYVIGLFPDLLPVEFRKKVEYPETVPILQGRDLDLAVLALIKYLTEVRNDLM SQNVKTGTNIMDVGSSLKLRRQLLEIVDTTLLKCYLLTNDALVASLLRLRDNHCHLAESE RALKRHHKHAELIILYQTRGLHRKALELLKKHANSPEDFGSPLAHHDRTVQYLQHLGSEQ VDLIFDFASWVIQSHPEDGLKIFIEDLPEVEELPRAKVYDFLYKNHRSLALSYLEHVVYE WQDSNALFHNALAVLYKDRILRLETQLQVDSSDPTLRCEYQDSKAKLRSFLEISRHCSPE AILVQFPYDCLFEERAILLGKVGRHEQALSIYTNILKDLPAAVDYCNVCYRSESSSNKEV YFYLLKLLLRPDDAVKIPGLAYPNEEPQQRQPDVERALETLDRYPSRIDPIKTLQILPAS IPLLKLKRFLQRSLESFASQRRELQLLRGLLYAEHLQVHEQRIEYQNQKVVITESNICHV CKKRFGNQSPRGGGGRGAGGRGGSRGGFGGDRGGFGDRGGFGDRGGGRGRGGFGDRGGFG GRGRGGGGGRGRGGFGDRGGRGRGGRGGGGRGGMGGGKKVFVEPHRHAGVFIARGKEDAL VTKNMAIGDSVYGEKRIAVEEEGTEKIEYRVWNPFRSKLAAAILGGVDQIHMPPGSKVLY LGAASGTTVSHVSDIVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRM LIGMVDTIFADVAQPDQARIVALNAQYFLKNGGHFVISIKANCIDSTAAPEAVFAGEVKK MQAEKMKPIEQLTLEPYERDHAVVVGIYRPPVTKK NT seq 3528 nt NT seq  +upstreamnt  +downstreamnt atgtatgacgcctatgaggcgttaccaattctggaaaaattacctttacaaatagagtcc atagctgcttacgatgagcacttgctagtagggacccatcaggggcacctgttgatgtac agtgttctgcaaggggcaagcaacgtccatttgctgagatccaacaagtattttgccaaa aagccaatacaacaactagctgttgttcctgagcaccagattctaattagtctttctgat taccttgtgactgttcatgatctgacagtctttaattttccagtcataacatcactcaca aaatctaagggagctacatatttcactcttgatgtcaaaagacaaacttccttgactggg gaaatatcagtagcagttagactatgtgttgtagtgaagaaaaaactgcaacttttttat tggaaaaatcgggagttccgagaattaggacctgatttagctctttccgatactcctcga ggtattggttggtgtagagaaacactgtgcttaggttttaaaggagagtactgtttacta aagctggaaggagagcaaagagatttgtttcctaccggaaaacaacctgaacctttggtt tgcgccttgcaaggtgataaatttgctttaggaagagatgaacaaactattatgatcgac attgatggcaatccgtgtacaaaatatacgctgacatggtcagagagaccgcttctacta gtcgaggactccccatacatccttggtgttttaacttcctgcattgaaatacgggcagca gaacctcggctacttgtccagcgattagaattgccaagagctaggttcatgacgccagtg atatcgagcaatgggcagatatacgtggcttctccgtctcacgtttggtgcctacatttg gtacctgtgcatttacagttacctcgcttgctggaagacaaacattttcagttagccatt caacttgcgaacttgtccagcgagccacaagatatccggacccaacaagttcaacatatc caatcattgtatgctttcagtttgtttcagaaacataattttgacgaatcgttgcaactc tttttcaagcttgccactgatccttcttatgtcattggactttttcctgatctactacct gtggaattcaggaaaaaagtggaatatcctgaaaccgtacctattctgcagggcagagat cttgatctcgctgtgttggccttgataaaatatcttactgaggttaggaatgacctaatg agccagaatgtaaaaacaggaaccaacattatggatgttggatctagtttgaagttaagg cgccaattgttggaaatagttgacactaccttgttgaagtgctatttgctgaccaacgac gctctggtagcatctttgttaaggttgcgggataaccattgtcatttagctgagagcgaa cgggcgttaaagcgccatcacaaacatgccgagcttataatcctataccaaactcggggt cttcatcgaaaagcacttgaattgctgaagaaacacgccaatagtccagaagatttcgga tccccacttgctcaccatgatcgtaccgtacaatatctccaacacctaggttcggaacaa gtagacctaatttttgactttgcctcatgggttatacaaagccatccagaagacggactc aaaatttttattgaagacttgcctgaagtcgaagaactaccacgtgctaaagtctacgat tttctttacaaaaaccaccgttctttagctctatcctatcttgaacatgtcgtttacgaa tggcaagattcaaacgccctcttccataatgccttggctgttctctacaaagatagaatt ctccgtttagagacgcaactgcaagtcgacagcagtgacccaacacttcgctgtgaatac caagattccaaggcaaagctaagatcgtttcttgaaatttcgcggcattgctctcccgaa gccatattggttcaatttccttatgactgtttattcgaggagagagctatactattgggc aaagttggtcgacatgaacaagcgttatcaatctatacgaacattctcaaggatttacct gcagccgtagactattgtaatgtctgctaccgatctgaatcttcatcaaataaagaggtc tatttttatttgctaaagctgctgcttcgacctgatgatgccgtcaaaattcctggtcta gcatatcctaatgaggaaccgcagcagcggcaacctgatgtcgaaagagctttggaaact ttagaccggtacccttcgcgtatagatccaatcaagacgttgcagatattaccagcaagt ataccgctgcttaaactgaaacgttttcttcagagaagcttagaatcttttgcatcccaa cgtcgagagctccagcttttgcgtggtctgctttatgcggaacatcttcaagttcacgag cagcgtattgaataccaaaaccagaaagtcgtgataaccgaatcaaacatctgccacgtc tgtaaaaaacgctttggaaatcaaagcccacgaggaggtggtggcagaggtgctggagga agaggtggttcaagaggaggatttggtggagatcgtggaggatttggtgatcgtggagga tttggtgatcgtggaggtggcagaggtcgtggaggatttggtgaccgtggagggtttggt ggtcgtggaagaggaggtggaggtggcagaggtcgtggaggatttggtgatcgtggtggt cgtggaagaggaggccgaggtggcggtggcaggggaggtatgggtgggggaaagaaagtg tttgttgagccccatcgtcatgctggagtatttattgccagaggtaaagaagatgctcta gtcacaaagaacatggctattggtgattcagtctatggagaaaaaagaatagcagtagag gaagaaggaactgaaaagattgagtatcgtgtctggaatcctttccgttcaaagttggct gcagctattcttggtggtgttgatcaaatccacatgcctcctggaagcaaagtgttgtat ttgggtgctgcctctggaacgacagtctcccacgtatctgatatcgttggaccggaagga ctggtctatgctgttgaattttctcatcgttctggtcgcgacttaattaacgttgccaag aaacgcaccaacattattccaatcattgaagatgcacgtcatccacataaataccggatg ctgattggcatggttgacacaattttcgcagatgttgcccaacccgatcaagcacgtatt gtagctcttaatgcgcaatatttcctcaaaaatggtggacacttcgtcatttctattaag gctaattgcatcgattcaactgctgcgccggaagctgttttcgctggtgaagtaaaaaaa atgcaagccgaaaaaatgaaacccattgagcagttgacgcttgaaccatatgagcgcgat catgccgtggtggttggcatatacagaccaccagtaactaagaaatga

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