KEGG   Daphnia magna (water flea): 116916456
Entry
116916456         CDS       T07514                                 
Name
(RefSeq) LOW QUALITY PROTEIN: negative elongation factor A
  KO
K15179  negative elongation factor A
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116916456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmk03021]
    116916456
Transcription machinery [BR:dmk03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     116916456
SSDB
Motif
Pfam: NELF-A_N K_channel_TID
Other DBs
NCBI-GeneID: 116916456
NCBI-ProteinID: XP_032777604
LinkDB
Position
LG1:complement(13415217..13417936)
AA seq 563 aa
MASHRETDTSLWLHNKLGISTDSWAGGSICSQLNPEVLKNIQECFVELQTQVKLKFLLSF
FQFSRRNLEEWKTELEEILEVAVXDGDPWVAMVAEILKTYPATGALNMEIGSATDEYTRK
IFNDLANDLRKLVKKHGETGMLPLECPYLNKTALFTVVGQQSHPIKHFTLKRKPKSAALR
AELLQKSTDAQNNLKKNPAPTVPLRSRGIPRKMTDTTPLKGIPSRHIGGFASPLSRAGST
PTSIGALGSSPSAGPNRPSPRTLAGRKDGGIKLLDITEQPIGFAQAKKRKRQQELEAAQK
AATESQATPANPSQPLSGEESETGSVTETPEKVTPTPDYAAGLLPSNPPPTPAAAVTPLA
TTSIPPLTPLKEPPRMTVVRPPAVPSISSLPSGSLASPAQVVRLVTSQPPAATSAATTVP
TVYRLVQPAAAAGQPTATTTATNQPAAPPKKSVALMLTREQMQEAQEMFKNANKVTRPEK
ALILGFMAGSRENPCPHLGNIVTIKLSEDEEIVTAGDGITTTRIVETHFQMNYAAGEWKR
IKKMRKMEETPASVATVLATATR
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggcgtctcatcgagagactgatacgtcactttggcttcataataaactgggaataagc
acagattcttgggcaggcggttcaatttgttcccagctcaatcccgaagtattgaagaac
atccaagaatgtttcgtcgaactgcaaacacaagtgaaactcaaattcctgctatctttc
ttccagttctccaggaggaacctggaagagtggaaaacagaattggaagaaatattggaa
gttgctgtangtgatggtgatccatgggtagcgatggtggctgaaatcctaaaaacgtac
ccagctactggggctctaaatatggaaattgggtctgctaccgatgagtatacaagaaaa
atattcaatgatcttgcaaatgatttgagaaaactagtgaaaaagcatggagaaactgga
atgcttcctttggaatgcccgtacttgaacaaaacagcactgttcactgtggttggccaa
cagtctcatccgattaaacattttacgcttaagaggaaaccaaagtcagcagcgctccgt
gccgagttgttacagaaatccaccgatgcccagaataacctgaaaaaaaatcctgctcct
acagttccactacgttcacgaggaattccgcggaaaatgaccgacacaaccccgttaaaa
gggattcctagccgacatattggaggattcgcatcgccactttcccgggcgggatctact
cccactagcattggtgcattaggttcgtctccatccgctggcccaaaccgtccgtccccc
cgaactctagctggaaggaaagacggtggcatcaaactactcgatatcaccgagcagcca
atcggttttgcccaagctaaaaagcgaaagcggcaacaagagttggaagctgcccagaaa
gcagccaccgagtcacaggctacgccagcgaatccatcacagcctttatcaggtgaagaa
tccgagacaggaagtgtcacggagactccggaaaaagttactccgacaccagattatgcg
gctggcctactgcccagcaatccaccaccaacgccggctgccgctgtcacaccactggcc
accacgtccatccctcctcttacacctttgaaagagccgcctcgaatgacagtcgtacgc
ccgcctgccgtcccgtcaatcagctctttaccttcaggttcacttgcgtcacctgctcaa
gtagtcaggcttgtcacaagtcaaccgccggctgcaacgtcagctgctacgaccgtgccc
accgtttaccgattagtccaacctgcagctgctgctgggcaacctactgcaacaacgacg
gcaactaatcaaccggcagctccaccgaaaaagagcgtagcactaatgctcacgcgtgag
caaatgcaggaagcccaagaaatgttcaaaaacgccaacaaagtcacgcgaccagaaaaa
gctctcatcctgggtttcatggcaggttctcgagaaaatccttgtccgcatctcggaaat
attgtcactatcaaattgagcgaggacgaggagatcgtgacggctggcgatggcatcaca
accaccagaatcgttgagacgcattttcagatgaactacgctgctggtgagtggaagcgc
attaaaaagatgagaaaaatggaagaaacacctgcctcagtcgctacggtcttagccacg
gcgacgaggtag

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