Daphnia magna (water flea): 116916496
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Entry
116916496 CDS
T07514
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116916496
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116916496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
116916496
NCBI-ProteinID:
XP_045025972
LinkDB
All DBs
Position
LG2:15673517..15684394
Genome browser
AA seq
2105 aa
AA seq
DB search
MNPPRPSRQDPALYQPSRNPPPAKPSAPGNVMMYNPNQYNAGYPPSNGSWGPPRQQPPLQ
QQQQQQAPLPTNQESWNWDENVNNFQNYTEASQTAAMVPKLQNAPPANPPTMYNVPDYSL
TQQVPNYQPEHAVNNNQYDSQAPSSNQNWGWNEGEDWGWGNEFQQQNTQQPQLSQPPLPA
GPVENPQPTNFPNMPPLPGNSGLETGFSTMSLSNQEREETQGEQQEQPAWSQPQHPTPTL
PEESNAASWSRVPTWGSALDHESPYEPGPESSYPRELGERNTFADGASFTDPSQSLPPAP
ASLSNDQMYAPTGVVQPAPPEQQQPLYSGGRLMHPPPSTLNLGTELTRVSPTPQIGSNME
KTETGADLAAPLESETSPSISMNRINPSLSYGSMTEGFNKGPQGMPFTGAEFPGAPPVGG
LPISTIDLSIGNRLPGSGSRSQSGTPSMERESERPDAEGGYENDQPTPLFSQPPTASYGA
MAERKVAQESPVGSRPSSRLAGSTPSTETPIANPSPYHLPGDGNAFVRPKPVSSTGSFYP
VATTSHVTAAPTPLATPAIARGSQEAVGSEFGPPISAVSLSRADNLATSSSMLPPSSQRM
IPGSGSHPHSLPMVATPQPQQSQPLPQPRPPGTVTPVTEQRIVTGFAKNDPVPVPPVGPG
APLLATTPQGPPPLQPVEEVRTQSLSRSPPPPHRSETIGSENPRANPNSGITPTGGTAAG
NGSVDRSDDRISNDRDRDRETKPHDRGSRVERERDRDDYDREGRNRYPDDDEDERFSTTY
RERDRRYDNERDRERDHRDPRRYDDRDRAYNRQDYDDDRRSGYGPPDRDRARDSRRRDTR
RSEYYLTEAEMYERSGGRRSSLYEGDNDPAGEFNRSAYGFNTSRDGRRRDNDRSRIDDRY
YQSSRDVSARAGADVSERAHSERDYRHSVSSASAGRRRDPRDLYYQQDPRYYGYAARDAA
YDPYRTGGYHHSAAAAAAAAAAYNQQMMNYNQQINHALKYNYALFEELRLKNPAAYSEWY
RSNYAQRYTPTVVTGGTVTALGSIAASEADRASVHSGRSSVNEDHPSMLPNHSISQQLIR
GSTTGLDQSHAYDYSLYQDEDNLPLTTQIRPTQDMTPHKFSCPHVIARFSPGGVLLRVLP
NSPKDGVAAHIELHDLNALLGDLPAAQEMKFFPGPLVPGQTHKQQVAVFCQQKIRRATED
ANQLVDRQSYILLWELLLLLLRQNGTIVGTDIAELLLKDHEILKEPIVQEVPESGTEVAM
VAADRTLVSRQTEASVTKKFRELLLFGNKKEALEWAMTQGLWGHALFLASKMDQRTYSSV
MIRFANGLALTDPLQTLYQLMSGRQPTAVTSCGDDKWGDWRPHLAMILSNSTSKSGSNSS
ELDKKSIVTLGDTLSARGFLLAAHFCYLVAQVEFGNYSNKASKLVLLSSSSSLSFDGFAT
NEAIQCTEVYEYARQLAAPEFTIPSFQSYKFLYATRLAEHGRPVEALQYCEAVGNVLVKY
ASTYSPSLIDQVYQLGSMLKYSDPQFLTENDGTSLGDPSWLTALEAAAKTAQADYSPTIS
GEKLTPEQQTTEPESLPPSTDYSSYQQQPNGPQYGEQQQNTQQQQQQQPQQQFYQPTNAQ
QPAYYDQQSGGQQQQQQQQNYSEDSSVHQQQQQQANEQQSNPYSSMTGQDLNSYGSSQYN
PSYSWQQPQQQQQQQPWSYGETSAANGAPQTDYWNPSSNNLKDSNRSVAVKSVRRQESRD
SAHSDDEHEDQIDETVEKPVDPMATAKRVVFGGTYPIDRPLTLKFGAAGAASSRRQQMNL
TLKTPRTFAIDEPIREDNSVESVTSADEDAGPSSFTDPSYFNPSASSSLGPSADSKHTAD
DKQSGKQEGGQSNNSSKAAAAARAQQAGSGGSWLGGFFSKFKPKTQMKLPDDKNPTIVWD
PKKNQWVDTGKDSEDEAATLAPPPKDASFQSLPPMPMTPAFSSPAPSSFTAAPAAANNNN
NEGNRFGLNKGRIGRAGRNAYVNPSNIKISAVNSPSPLLDPFPASTPSLSAAPQQFFVPS
PAMIDPSSAPVDFVSSPAQPDGPTTATQGQADSGERFLYNPTQLVPPAAVASGRPGLASR
GRYPR
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcctaggcccagtcggcaagatcctgctctctaccaaccaagcaggaatcct
ccaccagccaaaccatctgctccaggcaatgtgatgatgtacaacccaaatcagtataat
gcaggataccctccttcaaatggttcttggggaccaccaaggcaacagccaccgttacag
cagcagcaacaacaacaagctccactgccaactaaccaagaatcgtggaactgggatgag
aatgtgaacaatttccaaaattatacagaagctagccaaacagcagctatggtaccgaaa
cttcagaatgctccccctgccaatcccccaaccatgtataatgtgccagattactccttg
actcagcaagtgcccaattatcaacctgaacatgctgtcaacaacaatcagtatgatagt
caagctccaagcagtaatcaaaactggggttggaatgaaggagaagattggggatggggc
aatgagttccagcagcaaaatactcagcagccccaattgtctcagccgcctctaccagcc
ggcccagtcgaaaatccacagccaaccaactttccaaacatgccacccttacccggtaat
agtggtctggaaacgggttttagcaccatgtcgctgtctaaccaagagcgagaagaaacc
caaggcgaacaacaggagcagcctgcttggtcacaacctcaacatccaactccaacactg
ccagaagaatcaaatgcggcatcgtggtctcgagtaccaacttggggatcagccctggat
catgaaagtccctatgaacctgggcctgaatcttcctatccacgagagctgggcgaaaga
aacacttttgctgatggagcgtcatttactgatccatctcagtctctaccgccggcgccc
gcatctctcagcaacgatcagatgtatgcaccaacaggagtagttcaacctgccccacct
gaacagcaacagccattgtactctggtggtcgattgatgcatcctccaccatcgacgtta
aacttaggtacagaattgactcgagtctcacctactccccaaattgggtccaacatggag
aaaactgaaacaggtgccgatttggctgctcctcttgagtctgagacgtctccctctata
tccatgaaccgaatcaatcctagcctgtcatacggatcgatgacagagggattcaacaaa
ggaccacaaggaatgccgttcactggtgctgaatttcctggagcacctcctgttggtgga
ttgccgatatctaccattgacttgtccatcggcaatcgtttgccgggaagtggaagtcgt
tctcagtctggcacgccatcgatggagcgtgagagtgagcgacctgatgcagaaggtggt
tacgaaaacgaccaaccaactccgctcttttctcagccacctacagcttcatatggagcc
atggctgaacgcaaggtggcacaagagtcacctgttggaagccgaccttcttcgcgccta
gctggatcgactccttccacagagacaccaatcgccaacccttctccctaccacttacca
ggggatggtaatgcctttgttcggcccaaaccagtatcgagcactggaagtttttatcca
gttgccaccacctctcatgttacagcagcgccaactccgttggcgaccccagctatcgca
cgaggttcgcaggaagcggtgggcagcgaattcggccctcctatttcagccgtgtctctt
tccagggctgataatttggcaacatcgtcgtccatgttgcctccaagctcccagcgtatg
attccgggcagtggatcgcatccgcattcactaccgatggttgctactccgcaaccacaa
caatcacagcctctaccacagcctcgaccacccggtacggtaactcccgttaccgaacag
agaattgtcactggattcgcgaaaaacgatccagtacctgtacctcctgtcggtccaggg
gcaccgcttcttgctacaactcctcagggccctccgccgttgcaaccggttgaagaagtg
cgaactcagtcgctcagtcgttcacctccgccaccacatcgaagcgaaactatcggatcg
gaaaatccgcgggccaaccccaattccggcataacgccaacaggtgggacggctgccggg
aacggatcagtggatcgatcagacgatcgcatttcgaatgaccgcgatcgtgatcgcgag
acaaaaccgcatgaccgaggttctcgggtggaacgcgaacgagatcgtgacgattacgac
cgtgaaggtcgcaaccgctatccggatgatgacgaagatgaaagattttcgacaacgtat
cgcgaaagagatcgtcgctatgataatgaaagggatcgagaacgcgatcaccgtgacccg
cgtcgctatgacgaccgtgatcgcgcttacaaccgccaggattatgacgatgaccgtcgt
agcggttatggacctcctgacagagaccgtgcccgcgattctcggcgacgcgatacccga
cggtcggaatattatttgacggaagccgaaatgtacgagcgctcaggtggtcgcaggagc
tcactctacgaaggtgacaacgatccggctggcgaattcaatcgctcagcttacgggttc
aacacttccagggacggccgacgtcgtgataacgaccgttcgagaattgatgatcgctac
tatcaaagctcgagagatgtcagtgcaagagctggtgctgatgtttcggaacgagcccat
tccgaacgtgattatcgccattctgtttcatcggcctctgccggaagacgccgagatcca
cgtgatctctattatcaacaggatccgcgttattacggctatgccgctcgcgatgcggct
tacgatccgtaccgcactggtggataccaccattcggccgccgcagccgccgccgcagcc
gccgcctacaatcagcagatgatgaactacaaccaacaaattaaccacgccctgaaatat
aactacgcgttgttcgaggagttgcgtttaaaaaatccagccgcttacagcgagtggtac
cgcagcaactatgcccagcgttacacaccgacagtcgtgacgggcggcactgtcacggcc
ctaggaagtatcgccgcttccgaggcggatcgagctagcgtccattcgggacgcagctct
gtcaatgaggaccatccttcgatgttgcctaaccactctatctcacagcagctgatacgc
ggttcgaccacggggctggatcagtctcacgcttatgattatagtctttatcaagatgaa
gataatctcccgctgaccacacagattcggccaacgcaggacatgacacctcataagttt
tcctgcccacacgtcatcgcccgcttctcgccaggaggtgttctcttgcgtgttttaccc
aacagccccaaagatggcgtggcggctcacattgaacttcacgatttgaatgccctactt
ggcgatctgcccgcagctcaagaaatgaaattctttcccgggcctttggtaccgggccag
acccataaacagcaagtggccgtcttttgccagcaaaagatccgcagggcgacggaagat
gccaaccagttggtcgatcgacaatcgtacattctcttgtgggagcttttgttgctcctc
ctcaggcagaatggaacgatcgtcggtaccgatattgctgaactcctcttgaaggatcac
gaaatcctcaaagagcccattgttcaggaagtgccggaaagcggcacggaggtggcaatg
gtggcggcagataggaccctcgtttcgcgccaaacggaagcgtcggtgacgaaaaagttt
cgtgagttgcttctgtttggtaacaagaaagaggctcttgaatgggccatgacgcagggc
ctgtggggtcacgccctcttcttggcctcaaagatggatcaaaggacttattcgagcgtc
atgattcgttttgctaatggattggcattgacggatccactccaaactctttatcagctc
atgtcaggtcggcagccgacggcagtgacgagctgtggcgatgacaaatggggtgactgg
cgtcctcatctagcgatgatcctttccaattcgacatccaagtcgggcagcaattcgtct
gaattagacaagaaatcgattgtgacgttgggtgacacgctctcggctcgcggtttccta
ttggctgcccatttttgctacttggtggcccaagttgagtttgggaattattcaaacaag
gcgtccaagttggttttactctcttcatccagctcgttgtcctttgacggctttgcgact
aacgaagcgattcagtgcaccgaggtctacgaatacgctcgtcagctggctgctccggaa
tttacgataccgtccttccaatcgtacaagtttctttacgccactcggctggccgagcat
ggccggcctgttgaagccttgcaatactgtgaggctgttggcaacgttctagttaaatat
gcgtccacctactcaccgtctctcatcgaccaagtctatcagctcggctcgatgcttaaa
tacagcgacccgcaatttctaacggagaatgacggcacttcattaggcgatccatcttgg
ctgacggctttggaagcggccgccaagacagcccaagccgattattcacccacgattagc
ggtgaaaagttgactccagagcagcaaacgactgaaccagagtcccttccacctagtacc
gattattcgtcctatcaacagcagccaaatgggccacagtacggtgaacaacaacagaat
acccagcagcagcagcagcagcagccacagcagcaattctaccagccaacaaatgcgcag
cagccggcttactatgatcagcagtccggtggacagcaacaacaacaacaacaacagaat
tatagcgaagacagcagtgtccatcaacagcagcagcaacaagcaaacgaacagcagagc
aatccgtactcgtctatgaccggacaggatttgaattcttacggctcgtctcagtataat
cccagctacagttggcagcagcctcaacaacaacaacaacaacagccgtggagttacgga
gaaacgagtgcagccaatggagcgcctcaaacggattactggaacccatcaagtaacaat
ttgaaggattcaaatcggagtgttgcggtgaaatctgttcgacgacaagagtcgagagat
tcggctcattccgacgatgagcacgaggatcaaattgatgagacggtggaaaaaccagtg
gatccgatggcgacagctaaacgagtcgttttcggcgggacttatcccatcgaccgaccg
ctaacgcttaagtttggcgccgccggagccgcttcgtctcgccgacaacagatgaattta
actctcaagacgccgcgcacgttcgccattgacgaacccatccgagaagataattcggtc
gagagcgtgacgtcagctgatgaagacgccggacctagttcgttcacagatccgtcttat
ttcaatccgtcggcgtcttcttctctgggaccatcggcagattcaaaacacaccgcggac
gacaagcagagtggcaaacaggagggcggccaaagtaataacagcagtaaagctgcagca
gccgctagggctcaacaggccggaagcggaggcagctggttgggtggattcttcagcaag
tttaaacccaagacccaaatgaaattgcccgacgataagaacccgaccatcgtttgggat
ccgaagaagaatcagtgggtcgacacgggcaaggatagcgaggatgaagcagccacttta
gcacctcccccgaaagatgccagtttccagtcgttgccacccatgccaatgacgccggca
ttttcttcgcccgctccgtcctctttcaccgcagctcctgcagccgccaacaacaacaac
aacgaaggcaatagatttggattaaacaaagggcgaataggtcgagctggaagaaatgct
tacgtcaacccgtccaacatcaaaatcagtgcggtcaatagcccctcgccgttgctggat
ccatttccggcttcaactccatcgttatctgccgcaccgcagcaatttttcgttccgtca
ccggccatgatagatccatcatctgcaccagttgattttgtttcatcacccgcccaaccc
gacggtccgaccaccgccacgcaagggcaggccgattccggtgaacgattcctgtacaat
ccgacccagttggttccaccggcggctgttgctagtggaaggcctggccttgccagtcga
ggacgatatccgcgctga
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integrated database retrieval system
