Daphnia magna (water flea): 116916552
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Entry
116916552 CDS
T07514
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116916552
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
116916552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
116916552
NCBI-ProteinID:
XP_032777701
LinkDB
All DBs
Position
LG2:complement(7393204..7398484)
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AA seq
1466 aa
AA seq
DB search
MYYPVNWPRVIRLPTLGSPIIHRVVCNRDKILVAVLSSDTLTILYNKPCVPVACLKRDDK
SLNEHGENQEVEWKPDSSAIAITTSKGYLSFYDLSFLSDQQHLYEQKDSSVPGLRRESAE
LFVKDSIPAFSLKHCKTIPIDSGATGMVCIRDELMVATKYGHILRYHWNGTLNRDYCLDL
RRVPFCVDQLAARAVPITEPNTFVSLIDYSPLLGGFAVVLNDGRGAFLTATTLKFDPNQV
QGIWAPLDDVTCTAINHRYRLVAFGRRNSHADVYTIDETTGGLQLSHTLQLSSKDFPGSP
GPVQLLKWSPDGCCLALCWAEGAVSLWSTFGALLLCTLNWDYGSAQHHSLTVRAMDWGIE
GYQLWMISLSGDVLTQMELLKSPLTANPCMSSKERLYLHGQDRIYINISDTSPRRTTSSS
GGDSGALLSSKQWLVVQAPSAYMAGNWPLRFATLDAKCENLAVAGRTGFALYSFATRRWK
LFGNESQERDFVVAGGLLWLGSGGQAHVVMGCYNIGADRDEIRLYPRDNPRLDNASCTIQ
QVAGQILLLNMMRDTLLVYTSDCHISLFEAEVSGSGQLQLSRTQEIDVSTLGLHPACLVA
ATLTSLSHATEPQQTHGSSCQQNILLNVCGRVLLIQRSEGPDESDEGSAYYSAPTVLASS
VEILWVPNPDRLCPRKPHLTQALWLCCGAHGMRVWLPLYPREGDKGHHAFMSKRIMLPFQ
LHIYPLSVLFEEAILIGVETDTLLYPSSGTSENPWLIPLCVIERNSQVYLHHIFRQLIRR
NLGFHAWEIARGCTALPYFSHSLELLLHEVLEEEATSKEPIPDALLPSVLEFIQEFPVYL
KTIVQCARKTEVALWPYLFGAGVAANPRQLFQRCLDSKQLDLAASYLIILQNMEPVSISR
QYATVLLDAALENCSWDLAKELVRFLRAIDPSDADSATPSFSSAWKPGSAPSPAGSLLPS
KISLGSQTPPVSPNPEDFNFLLGSTVHRPGSRTAGSMKSPSSETNAGFHREITRSISETI
PISKNFSTPPAGKEVPPRKKSAPVNSHPITITAEHDPPDPSLEELYMDLILQRHVRRLLS
AGRLRDLGYLVAHFECPLVNWLSRERMRAARVDDFVSALRRLHTDFNWPFPTVSSQIVRK
LSNRSISLEEKLQALEVDVTAAPVMTSAQSDPPYQLNGDALLEPINGGLLLQTVEAQLKP
HVPSQEEWSVQSEGDQMSLAGEDRLNDLDGLQESSWGVHTMTLEVASAAAAINEPLQKAN
AQSELQLRYLLQLFTEADCLDWALILAVTLRDAMAVLRLVSMMRSALNSCQPSNQAATIE
VVTRLRDALLALSHWAETDCQGYRPFMNVIYGQVGILTKLILPQSNGPLTLPAEPSVVLE
SGAATQGTGTKSRHTSVTLLTPLGRVPEEDMDIPVFKTNGKLDLPPEGALLQLSHQLEQS
TKKEQQVNQHQGEPVPAQQGSSCVIS
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgtactacccggtcaattggccaagagtaatccggctgcccactctgggtagcccgatt
attcatcgagtcgtatgcaatagggataaaatccttgtagctgttttgtcttccgacacc
ctcacaatactgtataataagccatgtgttccagtggcctgcttgaaacgagacgataaa
tcactaaatgaacacggagaaaatcaggaagtggagtggaagccagattcttctgctatt
gccatcactacatctaagggctacttgtcattctatgatctgagtttcctgtcagatcag
caacacttgtacgagcagaaagattcttcagttccaggattgagaagagagagtgctgaa
ttatttgttaaagacagcattccagcattcagtcttaagcactgcaaaacaataccaatt
gacagtggtgctacagggatggtttgtattcgggatgaactgatggtggcaactaaatat
ggtcatattttgcgatatcattggaatggaaccctcaatcgcgactattgccttgacttg
aggcgggtgcccttttgcgttgatcaacttgctgccagagctgttcccataacagaacca
aacacattcgtctcactaatagattactccccattactgggcgggttcgctgtagtccta
aatgatggaagaggtgccttccttacagccactaccctgaagtttgatccaaatcaagtc
caaggtatttgggctccactagatgatgtaacgtgcacggctataaatcacaggtatcgc
ttggttgcatttggccggcgtaattcgcatgcggatgtttacactattgatgaaacaact
ggtggattacaactttcccacaccctgcagctcagcagcaaagatttccccggttcacct
ggtcctgttcagctgctcaagtggagcccagacggctgctgtttggccctttgctgggca
gagggagctgtttctttatggtccacttttggcgcgttgttactttgcacgcttaactgg
gactatggttcagctcaacatcattctttgaccgttcgcgctatggactggggcatcgaa
ggctatcaactctggatgatatctttgtccggcgatgtactgactcagatggagttgctg
aaatcacctttgacagctaacccttgcatgagctctaaagaaaggctttatcttcatgga
caggaccgaatatacataaacataagtgacacaagtccgcgccgaactacatcttctagc
ggtggcgattctggtgcattactaagcagcaaacagtggctcgtagtgcaagcaccatcg
gcgtacatggccggcaattggccattaaggttcgctacattggatgccaaatgcgaaaac
cttgccgtggctggtcggacgggttttgccttatattcttttgccactcgacgctggaaa
ctgtttggaaacgagtctcaagaacgtgattttgtcgtagccggagggcttttgtggtta
ggttctggaggccaagcgcatgtggttatgggctgttacaatatcggtgctgatcgagac
gaaatccgactctatccacgtgacaatcctcgacttgacaatgcttcctgcaccatacaa
caagtggcgggacaaattctcctgcttaacatgatgcgggatacgttattagtttacacc
tcagactgtcatattagtctttttgaagcggaggtatcaggaagtggacagcttcagtta
tctcgtacacaagaaattgacgtcagtacgctcggtttacatcctgcatgcttagtggca
gccacattgactagcttgagtcatgccacggagcctcaacaaacacacgggtcgtcttgt
cagcaaaatattttgctcaacgtgtgcggccgtgttctccttatacagcgtagcgaagga
ccggacgaaagtgacgaagggtcagcctactactctgcgcctaccgtactggcttcaagt
gttgaaattctttgggttcccaatcccgatagattgtgtccacgtaaaccacacttaacg
caagcgttgtggctttgttgtggtgctcatggtatgcgcgtttggctcccgctctatcca
cgtgaaggcgacaaaggacaccatgccttcatgtccaagcggatcatgttgccattccag
ctacacatttatccattgtccgttctttttgaggaagccattcttataggagtcgaaacg
gacaccttactttatccttccagtggaacttcggaaaatccgtggctcattcctttgtgc
gtaatagaacgcaacagccaagtatatcttcaccacatttttcgacaattgattcggcgc
aacttaggattccatgcttgggagatcgcccgtggttgcactgctttaccctatttctcc
cattcattggagctgcttttgcatgaggtgctagaagaggaagcaacaagcaaagagccc
atacccgatgctttattaccaagcgtgctcgaattcatccaagaatttcccgtttatcta
aaaactattgtccagtgtgcacggaaaacagaagtggctctttggccttatcttttcggt
gctggggtagccgccaatcctcgccaactgtttcagcgttgtctggattcgaagcagttg
gatttggccgcttcttatctcattattttgcaaaatatggaacctgtatcaatcagtcga
cagtacgccactgtactcttggatgctgcgcttgaaaactgtagttgggatctggccaaa
gagctggtccgctttttacgtgccatcgatcccagcgatgctgactcagcgacgcccagt
ttctcgtcggcctggaagcctggatcggctcctagtcctgcgggatctctcctaccatca
aaaattagcttgggctcgcagacacctccagtgagtcccaaccccgaggattttaatttt
ttattgggatctaccgttcaccgtcctggaagtcggaccgctggaagcatgaaatctccg
tcttcggaaactaatgccggatttcatcgtgaaatcactcgctcaattagcgaaacaatt
ccaattagcaaaaacttttctaccccaccagcagggaaggaagttccgcccaggaagaaa
tcagctccggttaattctcatccaattacgatcacagcagaacacgatccaccagatcca
tcactagaagaactctatatggacttgattttacaacgacatgttcgtcgtctactctca
gccggtcgtctgagggatctcggctacttggttgctcattttgaatgcccattagtgaac
tggctgagtagagagagaatgagagcagcccgggtggatgattttgttagcgccctacgc
cgtttacatacagattttaactggcctttccctacagtgagtagtcagatcgttcggaaa
ttatccaaccgtagtatatcgcttgaagagaagttgcaagcattggaagtggatgtcacc
gctgcccctgtaatgacatcggctcaatctgatcctccttatcagctaaatggtgacgcc
ttactcgaaccgattaatggtggactgttgcttcaaacagttgaagcgcagttaaaacct
catgttccttcccaggaagaatggagcgtccaaagtgaaggggatcaaatgagtctggct
ggcgaagatcgtcttaacgatctagatggcttgcaagaatcttcgtggggcgtgcacacg
atgacgctagaagtagcatcggctgccgctgctattaacgaaccactccagaaagccaac
gcccaatcagaattgcaattgagatatctgctacaacttttcaccgaggctgactgtttg
gattgggcgttgatcttggctgtgacccttcgagacgctatggcggttctaaggctagtc
agtatgatgagaagtgctttaaatagttgtcagccatcaaaccaggctgcaacgattgaa
gttgtcacgcgactgagagatgcgttgctagctttgtcacattgggcagagacggattgc
caaggctatcgaccttttatgaatgtcatctacgggcaagtgggtattttaactaaactt
attctgcctcaaagcaatggcccgttgactttacccgcggaaccaagcgttgtcttagaa
tctggagcagcaacgcagggtactggcactaaatcgcgccatacttctgtgactttattg
acgccattgggtcgcgtcccggaagaggatatggatattccggtttttaagaccaatggt
aaattggacctaccacctgaaggtgctttgttgcagctctcgcaccagttggagcaatca
acgaaaaaagagcagcaagtcaatcaacatcaaggcgaaccagtaccagctcaacagggc
tccagctgtgttatttcataa
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integrated database retrieval system
