Daphnia magna (water flea): 116916616
Help
Entry
116916616 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: helicase domino-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116916616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116916616
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
116916616
SWR1 complex
116916616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
Myb_DNA-binding
Flg_bbr_C
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116916616
NCBI-ProteinID:
XP_045025065
LinkDB
All DBs
Position
LG2:14234152..14247865
Genome browser
AA seq
2851 aa
AA seq
DB search
MPAVDLPNNFEDHKMESLRKRVKDHHIAMGLQTKEKFQEVLSELYFLQSGGNMMDFLSWK
RKPPTAYFEFVKTQPLELQIPATEDSPLFIPPNTTESPGQKNPVPTVVTKTSTPVKLPTN
VPSKNAVSASLPTFLRAPTTPQVGRPPTTVMTPEQIVEKAKQEAHVVQRIAELQREGLWS
EKRLPKVAEPPRAKSHWDYLLEEMVWLAADFAQERKWKKNSARKCGRMVLKHFQDKAAAA
AKAEKEEEQRLRKIASFVAKEIRTFWSNVEKLVEYKQQIRLEEKRKRVLDQHLNFIVNET
EKYSSLLTEGLKQPQERITEVKAEKLRESDGEFEPDDTTSTDDEETIAQEETLDSVDAAK
NNDREKEEIDALKRESEIPLEDILDNLPPEYLESLGKREVDADGTDEEKMSDDEYELNSD
ESEGDDEETIDQAEKEEVESRADELLALEAEKDMPIEKLLAKYSGSPNSHLVDNEDMEEE
EERGEDIGDSEGASDSEVEFEDDSKDNMEVDHHVKESLGIESLLDDSLGGQDVATSKLSD
AAALAESFQPKGNTLESTKVIAKVPFLLKYPLREYQHIGLDWMAAMYERKLNGILADEMG
LGKTIQTIGLLAWLACEKGIWGPHLVVVPTSVMLNWEMEFKKWCPSFKILTYYGSQKDRR
QKRMGWTKPNAFHVCITSYKLVIQDHQAFRRKRWRYFILDEAQNIKNFKSQRWQLLLNFQ
SQRRLLLTGTPLQNNLMELWSLMHFLMPDIFGSHRDFREWFSNPVSGMIEGNAEYNESII
RRLHKVLRPFILRRLKSEVEKQMPQKYEHVVMCRLSKRQRYLYDDFMSKAKTKETLSTGN
LLSVINVLMQLRKVCNHPNLFEPRPIVSPFQMDSIVYHTASPVYGLLDYNPFEHINLHTL
NLMLLDLEFTMTAYTAHRIRKFQVPAKLIEEIDRAPPLPPLCPRGKLRLHVTTNRQPQAQ
QGQGAGRGLPVTRPCPAVGVVSRPGTNSVLGNAGGVASPQQPRLGAPAPLLSSSAAAAAT
SGALTRPPLQVHLPQPTGTMNAISSSSASTVASSSDVPVKDSVREKISGSVDGRLNLSSA
VAQQILNVASNQNDNASNAGLRSNLRNLIAVSSSSNSMCIKPSTPPPVSAIASQPRASQN
GPEHPNGSKRSSKWNYDRSLFKHNPVDEKKRQERRDRLIFLAKLNKTKCEASPIWGSDVI
IAVTTTSQTRSSKIDESDREISQEALPWSRRGECYLQCLKATEPLVGRQNYESLWSETNA
IRRMLHTPEQYIDELSDILQRFVVYTPAVTAPPIVFHASHPPPSKLWGKQKRDYDLKSSL
SPLTSILHPIQSAMMTQFPDPRLIQYDCGKLQTLDNLLRHLKTGKHRVLIFTQMTRMLDV
LEVFLNHHGHIYLRLDGTTRVDQRQVLMERFNADRRIFCFILSTRSGGVGVNLTGADTVI
FYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRXAILPFMCDFVKILLFILCILFLLCRLIS
ERTVEENILKKANQKRLLGDIAIEGGNFTAATFKKQTIHDLFEVDANEADASKRMAEVLD
RPKTENSDATASSLNSANNVSEGVCPVAPNKAALGILESALAAAEDETDVAAARIVRAEA
AAEMAEFDESAPLGVGEDGENNIVDAEINKAEVELQQLEEQLTPVERYALKYMESSEECW
SAEQLRAAEAQIEEQKRAWELKRLATLTGNDDERGVLNDSNGGVTLEPDDGLLTYSHQDS
VNQRWISMDGLEEMPIWCPPTPPQDDSDVYMDYTLSHLYDTRIMEEASLPPVYVRKELKR
PRKESVQAPPDDGRRPAKVRKEETVYAPRSLFDRPSPALAKLRRDLKLQKCRGIVRPPIP
LPNLTLKTPALPIRPIEENENTPEWLIHEDWILLQAVQNLLELPLNLVVLTPAHTPNWDL
VADMVNSYSRSYRSPKQCRNRYFHVILPREEGKAAIDSSPKKIKKTKSLQPPIPTKTGNR
QMRTSQLFAADGNNSFTTVWHQKFETLKSIFHKKAPTNRSMLTGSGASANRNATNAKHAQ
VLQEAGISYDTPLNPVQVAAVRAERIAQKQKAAVAMAEQVQVQQQQQRLANLTTASPTVS
GAPGTPSSPATTARVTSTAPPSTLAANPMAGAAAVSSQMGSTVVVNTISSTSSSNTQHTL
LLQGSGGTNIHGSPVQQQVVLQSATGIRTQRPLGTLTVQEVVTGASPVRSQQQAGTLMSG
SSAAGQTVVTVGNLTAVQVQAATQMLASAGIAVSGAGVLNTVTTTAAGINKGASVTLVQT
GGTTVVSPATGATKTLTPTQLQYLRQQALAKQQQQRLQEQQLKKLQLVTAGGVGAAGATQ
QLTATGVTTTGQKLPLVGTVATSLAGTASSLSSLNTVQIAGQTPTGARTQLLKGNATAAA
LLGKGGTVARAIVTDSEMAALIKRQQQFQQQQKAVAAANAGSSNLQANLGQQQTVQIGAG
PNTTGITTAQFLAQAGLQVQTAPAAGGQPQVATLVKTVSTPGSMGGAPSVTIPVSAISVG
LPQVQMKGLTAAGVKAGTTSQQQLRQLTIQHQLLQQRKTQQQQQAKTSHLAQTVTLGTVK
GVPGQQLATAVGTVQLVQPVGGNASAGGATVGGATAVSKPGAMSTTVTMQQLQQVIRQVT
AGNAQVLVSSPSSGSGVSGTGLLTKNQQGQTVQARVIPVSQQGLKQTIQVVTTGQPGSAG
GTTRVATLNASATGGTMNPSLASALAAGTWKVAGGTDAQQKALLSQVSAALQSGQPVSLA
VRAGPNSSGGQTRILTTGTTFTTVTVTSVAAAPITATTPAPTVTTPSTATATVVPQPTVV
ATAPGTATVAGTTSGVVPDVETLATTNPNNS
NT seq
8556 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgttgatttgccaaataattttgaagatcacaaaatggagtctcttagaaag
agagttaaggatcaccatattgctatggggcttcagaccaaggaaaaattccaagaagtc
ttgtcagaattatacttccttcagagtggtggcaacatgatggatttcttgagttggaaa
aggaagcctccaactgcatactttgaatttgtaaagactcagcctcttgaacttcaaatc
ccagctacagaagattctcctttgtttatcccgccaaacacaactgaatcccctggacaa
aaaaatccagttcccacagttgtaactaaaacaagcactccagtcaaactaccaactaat
gtgccatctaaaaatgctgtgtcggcaagtcttccaacctttcttcgtgcaccaacaaca
ccccaagttggaaggccaccaactactgttatgactccagaacaaattgtagaaaaagct
aagcaagaggctcacgttgtgcaaagaatagcagagctccagcgtgaagggctctggtcc
gaaaaacggttgccgaaagtggcagagccgcctcgagcaaaatcgcattgggactatctt
ttggaagaaatggtttggcttgcggctgattttgctcaggaacgtaaatggaaaaaaaat
tcagcgagaaagtgtggcaggatggttttgaagcactttcaagataaggcggccgctgcc
gcaaaagccgaaaaggaagaagaacagagacttagaaagatcgcgtcctttgttgcaaaa
gaaattcgtacattctggtcaaatgttgaaaagttggttgaatacaagcaacagattcgt
ttagaagaaaagcggaagcgagtcttggatcaacatcttaatttcatcgtcaatgaaacc
gaaaagtattcgtctttgctcaccgaaggtctgaagcaaccacaagagcggatcaccgaa
gtgaaagctgaaaagctacgcgaatctgatggtgagtttgaacctgatgacaccacatca
acagatgacgaggaaactatagcacaagaagaaacgctggactcggtcgatgcagccaaa
aacaatgacagagaaaaggaggaaatcgatgccctgaaaagagaatctgaaattccgctt
gaagatatccttgataaccttccgcctgagtacctggaaagtttaggcaaacgtgaagtc
gatgctgatggaactgatgaggaaaaaatgtctgacgacgagtacgaattgaactcggac
gaaagcgaaggagatgatgaagaaacaattgatcaagcagaaaaagaagaagtggaatcc
agagccgacgaattgttggcattagaggctgaaaaggatatgcccatcgaaaaacttctg
gccaaatatagtggtagccctaattcccatcttgtcgataacgaagatatggaagaagaa
gaagaaagaggtgaagacattggtgattctgaaggtgcatcggattccgaagttgagttt
gaagacgattccaaagacaacatggaagttgatcatcatgtaaaagaaagcctcgggatt
gaatctcttttggatgactctcttggcggccaggacgttgccacttccaagctgtccgac
gcggctgctttagccgaaagtttccagcctaaaggaaacacactagaatcaacaaaggtg
atagccaaagtgccattcttgctcaaatacccattgagagagtaccaacatattggcctt
gattggatggccgcaatgtacgaacgaaaacttaacggtattttagctgatgagatgggt
ttaggcaaaactatccaaacaataggtcttctagcttggttggcatgtgaaaaaggtatt
tggggaccacatctggttgtcgttccaacttcggtgatgctcaattgggaaatggaattc
aaaaaatggtgcccctctttcaagatcctgacttactacggaagtcaaaaagatcggcgc
caaaaacgaatgggttggacaaaaccgaatgcatttcacgtctgcattacatcctacaag
ctagtgattcaagatcatcaggcattccgtcggaaacggtggaggtatttcatactcgat
gaagcacagaacattaagaacttcaagtcacaacggtggcaattgcttctgaattttcaa
tcccaacggcggttgcttcttactggcactcctttacagaataacttgatggagctctgg
tcgttaatgcactttcttatgcccgacatatttggatctcatagagatttccgggaatgg
ttctccaatcctgtttctggcatgatagaaggcaatgcagaatacaatgaatccatcatt
cgtagattgcacaaggttcttagaccatttattctgcgccgacttaaaagcgaagttgag
aaacagatgcctcaaaaatatgaacatgtcgttatgtgccgcttgtcaaaacggcagcgt
tacctgtacgacgacttcatgtccaaagccaaaacaaaagagacactatcaacaggcaac
cttttaagtgttataaacgtcctcatgcagttgcgaaaagtgtgcaatcacccgaatctt
ttcgaacctcggcctattgtttctccttttcaaatggattcaatcgtttaccatacagct
tcacccgtttatgggctccttgattacaatccctttgagcacataaatcttcatacgttg
aatctgatgcttctcgacttggagttcaccatgacagcttatacggctcacaggatccga
aagttccaagtgcccgcgaaactgattgaggagatcgatagagccccccctctcccccct
ctttgtcctcgagggaagctgcgtttgcacgttacgacgaacaggcaaccacaggcacag
caaggtcagggtgcagggagaggtctccctgtaacaagaccgtgccctgcagtgggagtg
gtgtccagaccaggaactaattctgtgcttggaaatgctgggggcgtggcttcccctcag
caacctcgccttggagctcctgctcctttactatcctcttctgctgccgcggctgctaca
agtggagccctcacgcgccctccgttacaagttcacttaccgcagccaacaggaacgatg
aatgcaatttcttcatctagtgcttcaacagtggcatcctcatcggatgtacccgtaaag
gatagtgttagggaaaaaatttctggatccgtagatggaaggttaaacttgtcttcggcc
gtcgctcaacaaatcctaaatgttgcatctaaccaaaacgacaacgcttcaaatgctgga
ttgcgttccaatctacgcaacctgatagcggtttccagttcgtcaaactctatgtgcata
aagccaagcacacctccccccgtttcggcaatcgcgtcgcaaccgcgtgcttctcaaaat
gggcctgaacatcccaatggatctaagagaagcagcaaatggaattatgaccgcagtctc
tttaaacataaccctgttgacgaaaagaaacggcaagagcgacgcgatcgtttgatattc
cttgctaagctgaataaaactaaatgtgaggcaagtccaatctgggggtctgacgtcatc
atagcggtaacaacgacatcgcaaacacgatcatcaaaaatcgacgaaagtgatcgtgaa
atatcccaagaggcattgccttggtcaaggcgaggggagtgttatcttcagtgtttgaaa
gctactgaacctctggtgggccgacaaaattacgaatctctatggtctgaaacaaatgcg
ataagacgtatgttgcataccccggagcagtatattgatgagttatcagatatacttcaa
aggtttgtggtgtataccccggctgtgacagctccaccaattgttttccatgcatcccat
cctcctccttctaagctgtggggcaaacagaaaagagattacgatctaaaatcaagtttg
tctcctctcacctcgatcttgcatccgatccagtcggcgatgatgacacaatttccagat
cctcgtctcattcaatatgattgcggaaaactacaaacgttggataatcttttgaggcac
ctgaagacggggaaacatcgtgttcttattttcacccaaatgacacggatgttggatgtg
cttgaggtcttccttaaccaccatgggcacatatacttgaggttggacggcaccactcgc
gtcgatcaaagacaggtattgatggagcgcttcaacgccgaccgcaggattttttgcttc
atcctgtctactcgttccggtggtgtcggcgttaacctcacgggggctgatacagtcata
ttttacgattcggattggaatcctaccatggatgcccaggctcaagatcgctgtcatcgc
atcggtcagacacgagacgtgcatatttacaggtaagcgattctgccttttatgtgtgat
ttcgttaaaattttgctctttattttgtgtattctgtttcttctgtgtagactgataagt
gaacgcacagttgaggaaaacattctgaaaaaggccaaccagaaacggttgcttggcgat
atagcgatcgagggcggaaatttcacagcagcaacgttcaaaaagcaaacaattcacgac
ctgtttgaagtggatgctaatgaagcggatgcatcaaaaagaatggcggaagtgctggat
cgtccgaaaacagaaaacagtgacgcaactgcgtcgtccttaaattccgcaaataacgta
tctgagggcgtctgtccggtggctcccaacaaagctgctctgggaattctggaatcggcc
ctagctgcagcagaagatgagacggacgttgctgcagcacggatcgtccgagcggaagcc
gctgcagagatggccgaattcgacgagtctgcaccgttaggggttggggaggatggcgaa
aataacattgttgatgctgaaatcaacaaagcagaagtagaacttcaacaacttgaagaa
cagttaacaccagtcgaacggtacgctctgaaatatatggagagcagcgaagaatgttgg
agtgccgaacagctccgtgcagccgaagctcaaattgaggaacaaaagagagcctgggaa
ctaaaacgtttggcaacgttaacggggaatgatgacgaacgaggagtgctgaatgactcc
aacggcggtgtaacattggagcccgacgatggactactcacatactcccaccaggattct
gtcaatcagaggtggatatccatggacggcctggaagaaatgccaatatggtgccctcca
acgcccccccaagatgacagtgatgtttacatggactacacactaagccacttgtatgac
actcgtatcatggaagaggcttctttgcctccggtttacgtacgaaaggaattgaaacga
ccacgcaaagaatctgtccaagctccgcctgatgatggtcgacgaccagcgaaagttcgc
aaagaagaaactgtgtacgctcctcgttcgttgttcgatcgtccttcacctgctttagcc
aagttgcggcgtgatctaaagcttcaaaaatgccgtggcatcgttaggccacctattcca
ctgccaaatcttacgctgaaaacaccagcactacccattcgcccaatagaagaaaacgaa
aacacaccggagtggctcattcacgaggattggatcctgttgcaggccgtgcagaacttg
ctagaacttcccttgaatctcgtggttcttactccagcccacacccccaattgggatcta
gtggctgatatggtaaattcctattcacgttcctatcgctcgccgaagcaatgccggaac
aggtattttcacgtgattctacccagagaagagggtaaggccgctatcgattccagtccc
aaaaaaattaaaaagactaaatctctgcaacctccaattcccaccaaaactgggaatagg
caaatgcgaacgtctcagcttttcgccgccgatgggaataattccttcacaactgtttgg
catcagaaattcgaaacgcttaaaagcatttttcacaagaaggctccgaccaatagatca
atgttaaccggcagtggtgcatcggcgaaccggaatgcaacgaatgcaaagcatgcacaa
gttcttcaggaagctggtatctcttatgatacgcctctgaatccggtacaggttgctgct
gttcgtgctgaaagaattgcccagaagcagaaagcagccgttgcaatggccgaacaagtc
caggtgcaacagcagcaacaaagattggccaatttgacgacagcgtctcccactgtaagt
ggagctcctgggacgccaagcagtcccgcaactactgcccgtgttacgtccactgcccct
ccatctaccttagcagccaatcctatggctggtgctgcagctgtttcgagccaaatgggg
tccacggttgtcgtgaacacgatatcctccacctcgtcctcaaacacgcaacacacgctt
ctgttgcaagggtcgggtggcaccaatatccatggatccccggttcagcaacaagttgta
cttcaaagtgcaactggcatacgtacgcaacgtccgttaggtactttgaccgttcaagaa
gttgttactggtgctagcccggtgcgtagccaacaacaggcaggtacactaatgtctggc
agttcggctgctggacagactgtcgtcaccgttggaaacttgacagcagtccaagtccaa
gccgcaacccagatgttggcgtcggccgggatagctgtctcaggggccggcgtgttgaac
acagtcaccactactgcggctggaatcaataaaggagcctctgtgacgctagtccagaca
ggagggacgacagtagtctcgccggcgacaggggcaaccaaaacactgacaccgactcaa
ttacagtatttacgacaacaggcattggctaaacaacagcaacagcggctacaggagcag
caattgaaaaaactacaattagttacggccggtggtgttggggctgcaggtgctacgcaa
cagcttacagctacgggagtgaccacgacgggtcaaaaactcccattggtcggaaccgtg
gccactagtttggctggaacagcttcatccttaagctcattgaacaccgtacaaattgcc
ggtcaaaccccaactggagcaagaacacagcttcttaaaggaaatgcaactgccgctgcg
ttactcggaaaaggaggaactgtggcaagagctatcgttaccgattccgaaatggcagcg
ctaatcaaacggcaacaacaatttcaacagcaacagaaagctgtcgctgccgccaatgct
ggttcttccaatcttcaagctaacctgggacaacagcagactgttcagattggagcaggc
ccaaatactaccggaattacaacagctcaattccttgcgcaggctggtctccaggttcaa
acggctccagcagctggcggtcaacctcaagtcgctacactagttaagaccgtttctaca
ccaggcagtatggggggagcacctagcgtaacgattccagtttccgctataagtgtcggg
ctccctcaggtgcagatgaaaggattaacagcagctggtgtgaaggcaggaactacatcc
caacaacagctaaggcagctcaccatacaacatcaactcctgcagcagcgtaaaactcag
caacaacagcaagcaaagacgtcccatcttgcacagaccgtcacgttaggaacggtaaaa
ggagtgcctggccagcagttggcaaccgcggttggaacagttcagttggtgcagcccgtc
gggggcaatgcttcagctggtggagctacggttgggggggccactgcagtttcaaaaccg
ggagccatgagcaccactgtgacgatgcaacaattgcagcaagttatccggcaagtaaca
gctggtaacgcccaagtcttggtatcttcgccaagctctggttctggcgtaagcggaacg
ggtttgcttacgaaaaatcagcaaggtcaaactgttcaggctagagttattcctgtttcc
caacaaggcttgaaacagactattcaggtggtcacaacaggccaaccgggatcggcgggt
ggaacgacgcgagtggcgacgttaaatgcatctgctacgggtggtactatgaatcccagc
ctagcatctgcattagctgctggaacatggaaagtggctggaggaactgatgctcaacag
aaagccctgctctcccaggtgtctgcagcattacagagtggccagcccgtatcattggca
gtccgcgcagggcctaactctagcggtggacaaaccagaattctgactactgggacgaca
tttaccactgtgaccgttacatccgttgccgctgcacctataacagcaacgactccggca
ccaactgtcactacccctagcacagctacagctaccgtagttccacagccaactgttgtg
gctacggcacctggtacggcgactgtagcaggaacgacttcaggtgttgtacccgatgtg
gaaacgctggctactactaaccccaacaattcgtga
DBGET
integrated database retrieval system
