Daphnia magna (water flea): 116916619
Help
Entry
116916619 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04142
Lysosome
dmk04144
Endocytosis
dmk05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116916619
04142 Lysosome
116916619
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116916619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116916619
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116916619
Membrane trafficking [BR:
dmk04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116916619
Exosome [BR:
dmk04147
]
Exosomal proteins
Proteins found in most exosomes
116916619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
ANAPC3
capSnatchArena
PSD2
Motif
Other DBs
NCBI-GeneID:
116916619
NCBI-ProteinID:
XP_032777775
LinkDB
All DBs
Position
LG2:complement(13826529..13834148)
Genome browser
AA seq
1663 aa
AA seq
DB search
MAQMLPIRFQEHLQLTSIGINAANIGFSTLTMESDKFICVREKVGETAQVVIIDLHDPTN
PIRRPISADSAIMNPASKVIALKAGRTLQIFNIEMKSKMKAHTMTEDVVFWKWISVNTIA
LVTEGAVYHWPMEGDSLPQKMFDRHSSLTGCQIINYRTDAKQTWLLLIGISAQQNRVVGA
MQLYSVERKVSQPIEGHAAAFSQFKMEGNPEFSTLFCFAVRSAQGGKLHIIEVGTPPTGN
QPFAKKNVDVFFPPEAQNDFPVAMQVSPKHDVLYLITKYGYIHLYDMETGTCIYMNRISA
ETVFVTAPHEPSSGIIGVNRKGQVLSVSVDEETIIQYITTAMQNPDLALRIATRNNLAGA
EELFMRKFNTLFQGGQYAEAAKIAANAPKGILRTPATIQRFQAVAAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKQADPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDYVFLLRSVMRISPDQGAMFAQMLVQDD
EPLADIAQIVDIFLEQNMIQPCTAFLLDALKNNRPAEGPLQTKLLEMNLLSAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLQANIRQNLQIGVQIATKYHEQLSTNSLIELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYNAERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHEGSVEPATHNALAKIYIDSNNNPERFLKENGYY
DSRVVGKYCEKRDPHLACVAYERGQCDRELIKVCNENSLFKSEARYLVRRRDPDLWVEVL
NESNQFRRQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLDSSVFSD
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNQLYEEAFAIFKKFDVNAS
AIQVLIENVNNLDRAYEFAERCNEPAVWSQLAKAQLQQGLVKEAIDSFIKADDPSAYLDV
VSTAHRTGGWEDLVRYLQMARKKARESFIESELIYAYARTNRLADLEEFIAGPNHADIQR
IGDRCYDDGMYEPAKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFAC
VDNKEFRLAQMCGLHIVVHADELEDLINYYQDRGYFEELINLLEAALGLERAHMGMFTEL
GILYSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAVLTMMQ
HPTEAWREGHFKDVITKVANIELYYKGIQFYLDYKPMMLNDLLLVLSPRMDHTRSVNFFT
KYNHLEMVKPYLRSVQNLNNKAINEALNSLLIDEEDYQGLRTSIDAFDNFDTILLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLFKDAMEYAAESKNAEIAEELLAWFLEQ
RNFDCFAACLYQCYDLLHPDIILELAWRHNIVDFAMPYLIQVMREYISKVDKLEAAESER
IEESDSQSQPPSMMIASQQLMLTAPGYAPAYAPGFTPGYGYGM
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatgttaccaattcgatttcaagagcatctccagctcacaagtattgggata
aatgctgccaacattggatttagcactctcaccatggaatcagataaattcatctgtgtt
agagaaaaggtgggagagacagcacaggtggtcatcattgacttacatgatccaaccaat
cctattagaagaccaatttctgctgattctgctatcatgaatccagccagtaaagtgatt
gccttgaaagctggaagaaccctccaaatatttaacatcgaaatgaagtcaaagatgaag
gctcacaccatgacggaagatgtggtgttttggaaatggatatctgtgaataccattgcc
ctagtcaccgaaggtgccgtctaccactggcccatggagggcgattcgcttcctcagaaa
atgttcgatcgccattcgagtcttacaggctgccagattatcaactatcgaacagacgcc
aagcaaacatggcttcttctcattggcatatccgcccagcaaaaccgtgtcgttggagcg
atgcaactttattccgtcgaacgaaaagtcagccaacctatcgaaggccatgcagctgcc
ttctcccaattcaaaatggagggcaatcctgaattctccaccttgttttgctttgcagtc
agaagtgctcagggcgggaagctgcatatcattgaagtgggaaccccacctaccggaaat
cagccttttgcgaagaagaatgtcgacgtttttttcccaccagaggcacaaaacgacttt
cccgtggcgatgcaggtcagcccaaagcacgacgtgctttacttgattacaaagtacggc
tacatccatctgtatgacatggagacgggtacttgcatttacatgaaccgaatttcggca
gaaaccgtttttgtcaccgctccacacgagccatcatcgggcatcattggtgtcaatcgc
aaaggccaagtgctgtctgtcagcgtagatgaagaaactattatccagtatatcacaaca
gcaatgcaaaacccagatcttgccctgcggattgccacgcgtaacaatcttgctggggct
gaggagctcttcatgagaaaatttaacaccttgttccagggtgggcagtatgccgaagcc
gcaaagattgcagccaatgcaccaaagggtattctaaggacacctgcaacgatccagcgc
ttccaagcagtggccgcacagccaggccagacgtctcctttgttgcaatattttggaatc
cttttggatcaaggccagttaaacaaatttgagtcgttagaactttgtcgtccagttctc
cagcaaggtcggaaacagcttttagaaaagtggcttaaagaggacaaacttgaatgctcc
gaagagcttggagacctggtgaaacaggccgatcctactctggccttatcggtttacctc
cgcgcaaacgtaccgaataaggtaattcagtgcttcgcggaaaccggccagttccccaaa
atcgtcctgtacgccaagaaagtgggctacacgcccgattacgtgttcctgttacgtagt
gtcatgcgcataagtcccgatcaaggagccatgttcgcacaaatgctggttcaagacgat
gaaccactggcagacatagctcaaattgttgacatattcctggagcaaaacatgatccaa
ccctgcactgctttccttttggatgccttgaagaataaccgtccagctgaaggaccatta
cagactaaattgttggagatgaatctcctttctgccccacaggttgcggatgctattttg
ggtaaccaaatgtttacccactatgacagggcccacgttgcacagctgtgtgagaaagct
ggcctacttcaaagggctttggaacactataccgatttgtacgatattaagcgtgccgtt
gttcacacccacctgctaaatccagaatggttggtgaattacttcggttcgctgtctgta
gaggattcgctagagtgccttcgcgctatgcttcaagcgaacatccgtcaaaatctgcaa
attggtgtccaaatcgccaccaagtatcacgaacagctgtcaacaaattcgctaattgag
ctttttgagtcttttaagagcttcgaaggattgttttactttttgggatctatcgtcaac
ttcagccaagaccccgaggtccattttaaatacattcaagctgcttgcaaaacggggcag
atcaaagaagtggagcgcatttgccgggagtcgaactgttataacgctgaacgagtcaag
aacttcctcaaggaggctaagttaactgatcagttgccgttgattattgtctgcgatcgc
tttgactttgtccacgacctggtgctatatctttatcgcaacaaccttcagaagtatatt
gaaatctacgtgcagaaggtgaatccttctcgcttgcctgtagttatcggtggtttgcta
gatgttgactgctcagaagatgtcatcaaatccctgatcctggtcgtacgcggccagttc
tcaaccgatgagcttgtggaggaagtagaaaagcggaatcgtcttaaacttcttttgccg
tggttggagtcgcgtatccatgaaggatccgtcgagccggccacccataatgctttggca
aagatttacatcgacagcaacaataatcctgagcgtttccttaaagagaatggatactac
gatagtcgcgtcgtgggtaaatattgcgaaaagcgggatcctcatttggcttgtgtggcc
tatgagcgcggccagtgtgaccgtgagctgatcaaagtatgcaacgagaattcgcttttc
aagtcagaagcccgctatctagttaggcgccgtgaccctgatctttgggttgaggtgcta
aatgagagcaaccagttcagacgtcagctaatcgaccaagtggtccagacggctctgtcg
gaaacccaagatccagaggatatctccgtcactgtcaaggctttcatgaccgctgacctt
cccaacgagctgattgagttgctggagaagatcgttctggacagctctgtgttcagcgat
catcgtaacttgcagaatctccttatcctaacggcaatcaaagccgatcgtactcgcgtg
atggagtatatcaaccgtttggataactatgacgcaccggatattgcaaacattgcgatt
tctaatcagctctacgaagaagcttttgcgattttcaaaaagttcgatgttaacgcatcg
gccatacaagtgttgattgaaaacgtgaacaatttggatcgtgcttacgagtttgctgaa
cgctgtaacgaaccagcggtttggtcccaattggccaaagctcagcttcagcagggtctg
gtcaaggaggcgattgattctttcattaaagccgatgatccttcagcctacttggacgtt
gtatctacggcacaccgtactggtggctgggaggacttggttcgctatctgcagatggct
cgtaagaaggcacgcgaatctttcatcgaatccgaattaatttacgcctacgctcggact
aatcggctcgccgatttggaggagtttattgccgggcccaaccatgccgacattcaacga
attggtgatcgttgttatgatgacggaatgtatgaaccagcgaaactactctataataac
gtttccaattttgctcggttggccataactttggttcacttgaaagagttccagggtgct
gtggattcggcccgcaaagccaacagcactcgcacatggaaggaggtgtgctttgcttgc
gttgacaataaggaattccgtttggctcaaatgtgcggcctacacattgttgtacatgct
gacgagctggaggacttgatcaattactatcaagatcgcggttatttcgaggagttgata
aacttgttagaagcagctcttggactggagcgcgctcacatgggcatgtttactgaactg
ggcattctttactcgaagtacaaaccagaaaagatgcgtgaacatcttgagcttttctgg
tcacgagttaacattccgaaggttttacgagctgccgaacaggcacatttgtgggctgag
ttagtcttcctgtatgacaaatatgaagagtacgataatgctgtcttaacaatgatgcag
caccccacggaggcatggagagagggtcacttcaaagatgttattaccaaagtggccaat
attgaactatattacaaaggcatccaattttatttggattataagccaatgatgctgaac
gaccttcttttggttctttcacctcgcatggatcacacgcgttccgttaatttctttacc
aagtataatcacttggaaatggttaagccttacttacgttcagttcagaatttgaacaat
aaggccatcaacgaagccctcaacagtttgcttatcgacgaagaagactaccagggtcta
cgcacgtcaattgatgcttttgataatttcgataccattctgttggctcaacgactggag
aaacacgaattaatagagttccgccgaatcgctgcgtatctgtacaagggaaataaccgc
tggaagcagtcggttgagttgtgtaagaaagatcgtctctttaaggatgcaatggagtat
gcagcagaatcgaagaatgccgagatcgccgaagaattgttggcttggttccttgaacaa
cgcaattttgattgctttgctgcttgcctctatcagtgttacgaccttcttcaccccgac
atcattcttgaactcgcatggcgccataatatcgttgactttgccatgccttatctcatc
caggtcatgcgtgaatacatttccaaggtcgataaactggaagcagctgaatctgagcgc
attgaagaaagcgattctcagagtcagcctccgtcgatgatgatcgcatcacagcagctc
atgttaactgcacccggctatgcacctgcctatgcccctggtttcacacccggatacggt
tacggcatgtag
DBGET
integrated database retrieval system
