Daphnia magna (water flea): 116916698
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Entry
116916698 CDS
T07514
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116916698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116916698
Spliceosome [BR:
dmk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116916698
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
HHH_2
Motif
Other DBs
NCBI-GeneID:
116916698
NCBI-ProteinID:
XP_032777910
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All DBs
Position
LG2:14334390..14337315
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AA seq
507 aa
AA seq
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MSLADELLADLEMDDDDTHMDLGVQLPEPSAVEVKTEIKQEFFVPPVAKLTLDDVCKLRN
SPQLVSILEEIEKYCGQNRTSENIQGPVEADPEYQLIVEANNLAVEIDNDIVAIHKFVRD
LYAKRFSELESLVINPLEYITTVRELGNEISQAKHSAVLQQHLTQATIMVLSVTASTTQG
KPLDGAELSRIMEACDTALELDKCKTRIYSYVESRMTFIAPNLSILVGAPIAAKLMGVAG
GLTALSKMPACNIQLLGNQKRTLSGFSQTATLPHTGFIFESPIVQDTPPDLRRKAARLVS
SKCTLAARVDAFHESCDGTIGRNFREDVERKLDRLQEPPPVKAIRPLPAPLEAPRKKRGG
KRVRRMKEKYAQTEMRKQANRMTFGEIEEDAYQEDLGYTRGMMGKGGPGRIRGPTIDEKT
KVRISKALQRNLQRQQAYGGATTVKRQVAGTASSVAFTPLQGLEIVNPQAAEKKVSEANI
RYFSNQGTFFNVKDVSSTPLPGGSSTK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggccgacgaattacttgctgatttggaaatggatgatgatgacactcacatg
gatctaggggtgcaacttcctgagccttcagcagttgaagtaaaaacggaaatcaagcaa
gaattctttgtaccaccagtcgcaaagttgactcttgatgatgtttgtaaattaagaaat
tcaccccagcttgtcagtatcctggaagaaattgaaaaatactgtgggcagaatcgtaca
tctgagaatattcagggacctgttgaagcagatcctgaatatcaactgattgtagaagcc
aataatttggcagtggaaattgacaatgacatagttgccattcacaagtttgtaagagac
ttgtatgcaaaaagattttcagagttggagtcattggtgattaacccacttgagtacatt
accaccgtaagggaacttggcaatgaaattagtcaagctaagcatagtgctgttttgcag
cagcaccttactcaggcaaccattatggttttatcagtgactgcctcaacaacacaaggg
aaacctctagatggtgcagaactgagtcggatcatggaagcatgtgacactgccttggaa
ctagataagtgcaaaaccagaatctattcctacgtggaaagtcgcatgacgttcatagca
ccgaacttgtcaattctagttggagcacccattgctgccaagttgatgggtgtagctggt
ggattaacggccctttcgaaaatgccggcctgtaacatccaattacttggtaaccaaaag
cgtaccttatctggattttctcagacagccaccttgccccacacgggttttatctttgag
tcgccaatcgtgcaagatacacctccagatcttagacgtaaggcagcacgtttagtttcc
tcgaaatgtaccctagcagccagggtggatgcgttccacgaaagttgcgatgggactatt
gggcgcaattttcgtgaagatgtggaacgtaaattggacagacttcaagagcctccacca
gtaaaggcgattaggcctttgcctgccccgttagaagctcctcgaaagaaacgtggtggt
aaacgtgtccgccgaatgaaggagaaatacgcccaaacggaaatgcgaaaacaagctaac
cgcatgacgttcggagaaattgaagaagacgcataccaagaagatttgggctatacccga
ggcatgatgggcaaaggcggaccaggtcgcatacgaggcccgaccattgatgagaagacg
aaagtacgcatttcgaaggccctgcaaagaaatctacagcgtcagcaagcgtatggaggg
gctactaccgtcaaacgccaagtggccggtacggcttcatctgtggcttttactccgctc
cagggtcttgaaattgttaatccgcaagcagctgaaaagaaagttagtgaggccaacatt
cggtacttttcaaaccagggtacattcttcaacgtcaaagacgtcagctcaacgccgtta
cctggtggcagttcgactaagtag
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